Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AL161912.4-201ENST00000623889 2468 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC011933.2-201ENST00000578539 2790 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RNU1-136P-201ENST00000384181 164 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RNU6-606P-201ENST00000384721 111 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RNU6-952P-201ENST00000391164 108 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 MIR1203-201ENST00000408812 85 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC074085.1-201ENST00000413598 418 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 MRPL53P1-201ENST00000414323 319 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC126120.1-201ENST00000431082 470 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RPL23AP19-201ENST00000436229 369 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RPS7P5-201ENST00000441482 581 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC012123.2-201ENST00000485809 248 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RPL7P51-201ENST00000490532 749 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC074255.1-201ENST00000511259 501 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RNU6-976P-201ENST00000516086 111 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC139365.2-201ENST00000517972 253 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 HIGD1AP6-201ENST00000521833 279 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AP003072.2-201ENST00000527756 676 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 HMGN2P36-201ENST00000529541 409 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC124068.1-201ENST00000563131 678 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC009962.1-201ENST00000567327 3813 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC090312.2-201ENST00000582687 378 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC025857.2-201ENST00000602711 238 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 uc_338.11-201ENST00000619132 160 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AC239868.2-201ENST00000564237 4527 ntBASIC5.23□□□□□ -1.57
ATG4DQ86TL0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4DQ86TL0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AL355488.2-201ENST00000609909 2850 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 MTND5P28-201ENST00000438005 1594 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 Z95114.1-201ENST00000624264 14574 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNA5SP435-201ENST00000364044 108 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNU4-66P-201ENST00000365199 138 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 Y_RNA.364-201ENST00000365532 101 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 OR52E6-202ENST00000379946 954 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNU6-1013P-201ENST00000384180 107 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 Y_RNA.489-201ENST00000384410 101 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNA5SP284-201ENST00000384547 118 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 MIR130A-201ENST00000385274 89 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RN7SKP158-201ENST00000410453 326 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNU6-193P-201ENST00000410977 107 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RNU2-64P-201ENST00000411315 191 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 PRPS1P1-201ENST00000445305 876 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 REG1CP-206ENST00000447469 496 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC104308.1-201ENST00000454621 333 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC018638.3-201ENST00000461273 132 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC011476.1-201ENST00000466725 307 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 GMFBP1-201ENST00000467831 427 ntBASIC5.22□□□□□ -1.57
ATG4DQ86TL0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4DQ86TL0 RPS17P15-201ENST00000475609 349 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 390.4 ms