Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 NANOGP10-201ENST00000453325 895 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AL035090.1-201ENST00000454835 332 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AL590639.1-201ENST00000456484 337 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC006512.1-201ENST00000468816 291 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC012181.1-201ENST00000479895 423 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 RPL5P22-201ENST00000480199 884 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 ATP5LP5-201ENST00000483050 299 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 SNORA70.20-201ENST00000516848 126 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC137627.1-201ENST00000545761 289 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC016925.2-201ENST00000605108 242 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 uc_338.11-201ENST00000619132 160 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC244100.1-202ENST00000621554 382 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC000095.2-202ENST00000637415 154 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 LARP1BP1-201ENST00000506036 1359 ntBASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3DQ7Z6J8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC015799.1-201ENST00000622996 3122 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC011493.1-201ENST00000596753 1632 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC010329.2-201ENST00000595195 2737 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC140134.1-201ENST00000511830 3544 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC130650.2-201ENST00000618736 2403 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RNA5SP326-201ENST00000363209 110 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RNU6-97P-201ENST00000363387 104 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 Y_RNA.234-201ENST00000364409 97 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RNA5SP30-201ENST00000365552 115 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MTCYBP4-201ENST00000401524 249 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 HMGB1P20-201ENST00000402555 677 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RPL36AP36-201ENST00000418616 301 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC012065.2-201ENST00000421295 375 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MED13P1-201ENST00000428342 171 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AL590233.1-201ENST00000430017 456 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 TIMM9P1-201ENST00000436122 256 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MTND5P22-201ENST00000458380 195 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 RPL21P99-201ENST00000480369 423 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC005741.1-201ENST00000511094 432 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC093012.1-202ENST00000549403 582 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 uc_338.15-201ENST00000615470 191 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 AC093671.1-201ENST00000624981 2929 ntBASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBE3DQ7Z6J8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
UBE3DQ7Z6J8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
UBE3DQ7Z6J8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 268.6 ms