Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AP000873.1-201ENST00000463987 400 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC006518.1-201ENST00000541449 943 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 MIR3922-201ENST00000585192 84 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 RN7SL622P-201ENST00000585292 275 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 FRG1HP-204ENST00000617940 757 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC022306.3-201ENST00000619930 550 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 MIR6075-201ENST00000620782 95 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 U6.98-201ENST00000637157 84 ntBASIC4.37□□□□□ -1.71
CTR9Q6PD62 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.37□□□□□ -1.71
CTR9Q6PD62 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTR9Q6PD62 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTR9Q6PD62 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTR9Q6PD62 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC007823.1-201ENST00000569932 1566 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTR9Q6PD62 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTR9Q6PD62 RNU6-543P-201ENST00000362576 108 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 RNU6-468P-201ENST00000384003 109 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 RNU6-1257P-201ENST00000384625 110 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 NDUFB1P1-201ENST00000435191 180 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 RPL7P29-201ENST00000437151 728 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 RNF2P1-201ENST00000442955 1010 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 GXYLT1P1-201ENST00000446657 490 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL358232.1-201ENST00000448030 501 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC006511.1-201ENST00000470614 315 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC005726.1-201ENST00000494679 427 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 RN7SKP157-201ENST00000516174 282 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL121594.4-201ENST00000556211 1196 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC090666.1-201ENST00000578241 445 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AC068620.3-201ENST00000602749 560 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL163642.2-201ENST00000604722 1019 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 BRDTP1-201ENST00000605735 677 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 AL139022.2-201ENST00000606934 443 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 AP000553.6-201ENST00000641242 118 ntBASIC4.36□□□□□ -1.71
CTR9Q6PD62 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTR9Q6PD62 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.36□□□□□ -1.71
CTR9Q6PD62 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 RNF6P1-201ENST00000444889 1784 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 SNORD9-201ENST00000362566 104 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 RNA5SP119-201ENST00000362715 117 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 RNU6-207P-201ENST00000384137 107 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 PTMAP5-201ENST00000393073 333 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AP002784.2-201ENST00000397300 549 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC093578.1-201ENST00000415219 368 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 MTND4P11-201ENST00000417020 1058 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 RPL23AP12-201ENST00000467573 473 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC093801.2-201ENST00000503966 1050 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC006499.5-201ENST00000505037 514 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 SNX5P1-201ENST00000505757 1041 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 RN7SKP18-201ENST00000516005 275 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AP003717.3-201ENST00000544832 1180 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC006254.3-201ENST00000603353 884 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC010680.4-201ENST00000605334 543 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC007275.1-201ENST00000621243 671 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC091905.1-201ENST00000624400 311 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms