Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 MIR208A-201ENST00000362287 71 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 SNORA51.2-201ENST00000364595 132 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 SNORA70.4-201ENST00000365509 134 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC234772.1-201ENST00000377927 937 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 RPS7P15-201ENST00000415804 584 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC244098.2-201ENST00000422068 99 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC005517.2-201ENST00000424673 553 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC114878.1-201ENST00000441166 358 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 RPS15AP29-201ENST00000445539 400 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC008011.1-201ENST00000545989 227 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC079791.1-201ENST00000605356 973 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC069209.1-201ENST00000619282 651 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC007823.1-201ENST00000569932 1566 ntBASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
H3F3CQ6NXT2 AC090337.1-201ENST00000579651 2074 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL365440.1-201ENST00000436135 2167 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 SNORD46.1-201ENST00000364139 104 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 PTMAP5-201ENST00000393073 333 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC007390.1-201ENST00000415722 356 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 MTCO1P43-201ENST00000431831 488 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL159987.2-201ENST00000432754 307 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC092809.1-201ENST00000441469 474 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC010655.1-201ENST00000449336 292 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RPL23AP15-201ENST00000450202 459 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC073522.1-201ENST00000483312 377 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RN7SKP244-201ENST00000516513 307 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 MIR4504-201ENST00000577413 92 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC016911.1-201ENST00000613297 452 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC005156.1-201ENST00000613371 573 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AC084757.4-201ENST00000616350 526 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL732618.1-201ENST00000623251 301 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 U6.105-201ENST00000637379 88 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 AL392088.2-201ENST00000637607 285 ntBASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
H3F3CQ6NXT2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms