Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-193P-201ENST00000410977 107 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RPS17P17-201ENST00000419392 409 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC093151.1-201ENST00000427711 313 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 NRBF2P3-201ENST00000432731 865 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RPS3AP54-201ENST00000435535 734 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 DDX3P2-201ENST00000446138 111 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AL596266.1-201ENST00000448132 400 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 MIR2053-201ENST00000459295 91 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 PPP1R11P1-201ENST00000486095 376 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RPS27P23-201ENST00000487608 251 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RPS4XP18-201ENST00000495480 763 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 HMGB3P17-201ENST00000504195 649 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RNA5SP228-201ENST00000516232 133 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RNU6-941P-201ENST00000516346 108 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 IGHV3-63-201ENST00000518422 341 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC022616.3-201ENST00000523940 148 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC027667.1-201ENST00000545814 304 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC069307.1-201ENST00000602820 447 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AP001521.1-201ENST00000609150 300 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 U2.1-201ENST00000618978 145 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 uc_338.11-201ENST00000619132 160 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC007546.1-201ENST00000619452 559 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC005224.3-201ENST00000584683 2140 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RNU4-1-201ENST00000363925 141 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RNU6-99P-201ENST00000364721 107 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.364-201ENST00000365532 101 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC007161.1-204ENST00000423039 460 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 SRSF1P1-201ENST00000424058 520 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 HMGB1P12-201ENST00000438594 598 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RPS27AP15-201ENST00000447672 466 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC104308.1-201ENST00000454621 333 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RPL5P30-201ENST00000465511 891 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC090142.1-201ENST00000465776 462 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RNU6-1220P-201ENST00000517126 108 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC078899.1-201ENST00000521432 1185 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 HMGB1P40-201ENST00000525121 540 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 MIR4301-201ENST00000577203 66 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC107871.2-201ENST00000612894 502 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AC100827.5-201ENST00000615883 426 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 AL049780.3-201ENST00000624612 1583 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 CCT8P1-201ENST00000413611 1657 ntBASIC7.06□□□□□ -1.28
RC3H1Q5TC82 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RC3H1Q5TC82 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC114546.3-201ENST00000623582 1734 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 RNU6-666P-201ENST00000363499 107 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 RNY1P12-201ENST00000364251 105 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 SNORA16A-201ENST00000384342 137 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AL356968.1-201ENST00000416622 474 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 RPL7P4-203ENST00000430239 730 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC006466.1-201ENST00000438721 289 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 TXNP5-201ENST00000441043 315 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 SLC25A18P1-201ENST00000449385 454 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AL935212.3-201ENST00000450729 284 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 GMFBP1-201ENST00000467831 427 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 RPL21P99-201ENST00000480369 423 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms