Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC107982.3-201ENST00000584957 985 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC096947.1-201ENST00000603233 470 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC004696.1-201ENST00000614345 607 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 ZYXP1-201ENST00000617638 118 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 DDX6P1-205ENST00000441966 1436 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AF117829.1-206ENST00000621883 3802 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AL049693.1-201ENST00000402760 611 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AL035423.1-201ENST00000420331 213 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC241520.1-201ENST00000422654 1099 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC008065.1-201ENST00000428525 348 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 RPL23AP20-201ENST00000447965 421 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AP002371.1-201ENST00000463604 433 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 SNORA70.17-201ENST00000516449 133 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AP001207.2-201ENST00000519490 539 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC103843.2-201ENST00000530523 682 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC105036.1-201ENST00000566222 271 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC022916.3-201ENST00000592961 742 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AP003117.1-201ENST00000602771 554 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AL161912.3-201ENST00000605404 628 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AL390240.1-201ENST00000612950 384 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC58Q4VC31 AC010733.2-201ENST00000589496 5702 ntBASIC2.91□□□□□ -1.94
CCDC58Q4VC31 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CCDC58Q4VC31 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC58Q4VC31 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.9□□□□□ -1.94
CCDC58Q4VC31 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC58Q4VC31 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC58Q4VC31 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC126755.2-208ENST00000327792 462 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC138969.1-213ENST00000331436 462 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 SBDSP1-204ENST00000453858 737 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 NECAP1P2-201ENST00000455668 727 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 APOOP4-201ENST00000513530 597 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 BNIP3P5-201ENST00000562290 498 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AL590392.1-201ENST00000604960 446 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC007620.3-201ENST00000608131 497 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AL136520.1-201ENST00000600311 1322 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 AL365440.1-201ENST00000436135 2167 ntBASIC2.9□□□□□ -1.95
CCDC58Q4VC31 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CCDC58Q4VC31 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 RNA5SP197-201ENST00000363357 119 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 SNORD3H-201ENST00000384486 214 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 RNA5SP229-201ENST00000410809 99 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 RAP1BP1-201ENST00000412709 553 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms