Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA70.17-201ENST00000516449 133 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 MIR2276-201ENST00000516886 89 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.58□□□□□ -2
HIST1H1AQ02539 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H1AQ02539 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AC073476.4-201ENST00000628409 72 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AL392088.2-201ENST00000637607 285 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.58□□□□□ -2
HIST1H1AQ02539 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.58□□□□□ -2
HIST1H1AQ02539 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H1AQ02539 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 RNU1-101P-201ENST00000391171 127 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 MIR1193-201ENST00000408109 78 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 RNU6ATAC-201ENST00000408749 126 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 Z99755.1-201ENST00000414048 380 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.57□□□□□ -2
HIST1H1AQ02539 HSPE1P1-201ENST00000421494 318 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 AL445584.1-201ENST00000431451 330 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 ELOCP11-201ENST00000436690 332 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 RPL21P2-201ENST00000440049 481 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 ELOCP16-201ENST00000444494 332 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 ARL5AP2-201ENST00000444698 533 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC073387.1-201ENST00000453261 709 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC104619.4-201ENST00000510773 249 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 SNORD59.2-201ENST00000516873 68 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H1AQ02539 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H1AQ02539 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC084824.1-201ENST00000550917 1005 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AC112230.1-201ENST00000604342 547 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 OR2BH1P-201ENST00000608850 864 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 MIR6810-201ENST00000622701 70 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 AP003072.5-201ENST00000623872 773 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H1AQ02539 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HIST1H1AQ02539 AL645937.1-201ENST00000641739 1652 ntBASIC2.57□□□□□ -2
HIST1H1AQ02539 MTND5P19-201ENST00000424872 1794 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC011978.2-201ENST00000569835 2054 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.56□□□□□ -2
HIST1H1AQ02539 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 SNORA57.1-201ENST00000391227 145 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 SNORA26.7-201ENST00000391288 122 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 RSL24D1P1-201ENST00000404972 493 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 RN7SKP159-201ENST00000410657 292 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 CYCSP19-201ENST00000411715 316 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC007064.3-201ENST00000422608 359 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC104332.2-201ENST00000429959 156 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AL035458.1-201ENST00000433096 585 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AL035246.1-201ENST00000433554 1255 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 MTCYBP29-201ENST00000436327 1006 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC091564.1-201ENST00000464563 479 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.56□□□□□ -2
HIST1H1AQ02539 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC118282.1-201ENST00000506408 765 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC119751.1-201ENST00000513357 765 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC239860.2-201ENST00000525886 270 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC055876.1-202ENST00000567053 138 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 MTCO3P24-201ENST00000572729 782 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.56□□□□□ -2
HIST1H1AQ02539 SS18L2P2-201ENST00000583960 235 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC245128.3-201ENST00000594721 748 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 SNRPGP15-201ENST00000600149 222 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC113194.1-201ENST00000606037 500 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC012213.4-201ENST00000606457 354 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC131902.3-201ENST00000611767 581 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 RMST_5.1-201ENST00000618704 126 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 AC068831.8-201ENST00000620171 435 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms