Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX6-1P78426 Y_RNA.6-201ENST00000362350 114 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 SNORA70E-201ENST00000384492 135 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 CYB5AP4-201ENST00000396692 399 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC245028.1-201ENST00000423259 256 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AL360081.1-201ENST00000428299 555 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC073614.1-201ENST00000438690 650 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 snoU13.20-201ENST00000459180 104 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 ACTR3P3-201ENST00000480448 893 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC013356.1-201ENST00000489027 564 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC023424.2-201ENST00000493479 777 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC096751.1-202ENST00000502691 1067 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 RNA5SP373-201ENST00000517271 95 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC079075.1-201ENST00000559543 878 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 MIR3682-201ENST00000581338 84 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 MIR4697-201ENST00000582977 78 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC009977.1-201ENST00000586015 570 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 EIF3FP1-201ENST00000613970 806 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 AC090527.3-201ENST00000619041 548 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX6-1P78426 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX6-1P78426 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
NKX6-1P78426 AC025574.1-201ENST00000554784 1653 ntBASIC4.61□□□□□ -1.67
NKX6-1P78426 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX6-1P78426 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 RNU6-259P-201ENST00000383999 107 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 SNORA51.8-201ENST00000384234 132 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 RNU6-297P-201ENST00000384636 107 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 SNORD115.1-201ENST00000391109 76 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 RPS3AP3-201ENST00000411933 242 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 RPS27AP12-201ENST00000429552 465 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 RPS20P32-201ENST00000456044 356 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AL049874.2-201ENST00000492636 288 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC138853.1-201ENST00000503549 823 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.6□□□□□ -1.67
NKX6-1P78426 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 MTCO3P44-201ENST00000510977 541 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 HIGD1AP3-201ENST00000515857 278 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 MTND1P5-201ENST00000517906 940 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 IGKV2D-36-201ENST00000518643 226 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AP003117.2-201ENST00000606010 545 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 AC244107.2-201ENST00000611773 76 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX6-1P78426 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms