Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CDC42P4-201ENST00000510507 563 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 AC104986.1-201ENST00000517978 436 ntBASIC4.36□□□□□ -1.71
RAE1P78406 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 BRD9P1-201ENST00000529855 560 ntBASIC4.36□□□□□ -1.71
RAE1P78406 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.36□□□□□ -1.71
RAE1P78406 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 AL133457.1-201ENST00000564251 987 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC091042.1-201ENST00000579213 173 ntBASIC4.36□□□□□ -1.71
RAE1P78406 MIR3934-201ENST00000579806 107 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 AC091178.1-203ENST00000584586 279 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 AP000403.1-201ENST00000603349 851 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC013244.1-201ENST00000604279 193 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC112187.2-201ENST00000604345 283 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC087241.4-201ENST00000612441 480 ntBASIC4.36□□□□□ -1.71
RAE1P78406 uc_338.18-201ENST00000615451 175 ntBASIC4.36□□□□□ -1.71
RAE1P78406 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.36□□□□□ -1.71
RAE1P78406 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 U6.101-201ENST00000637707 76 ntBASIC4.36□□□□□ -1.71
RAE1P78406 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 BTBD10P1-201ENST00000549824 1352 ntBASIC4.36□□□□□ -1.71
RAE1P78406 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 AL356473.1-201ENST00000406203 1408 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AP002907.1-201ENST00000606361 1430 ntBASIC4.36□□□□□ -1.71
RAE1P78406 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 AC097504.1-201ENST00000515103 2415 ntBASIC4.35□□□□□ -1.71
RAE1P78406 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.35□□□□□ -1.71
RAE1P78406 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 AP000542.2-201ENST00000623199 6179 ntBASIC4.35□□□□□ -1.71
RAE1P78406 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 RN7SKP115-201ENST00000363177 317 ntBASIC4.35□□□□□ -1.71
RAE1P78406 RNU6-146P-201ENST00000384602 108 ntBASIC4.35□□□□□ -1.71
RAE1P78406 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 RN7SKP56-201ENST00000410513 331 ntBASIC4.35□□□□□ -1.71
RAE1P78406 NUP35P2-201ENST00000416748 943 ntBASIC4.35□□□□□ -1.71
RAE1P78406 RPL21P32-201ENST00000419877 477 ntBASIC4.35□□□□□ -1.71
RAE1P78406 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.35□□□□□ -1.71
RAE1P78406 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 AL590762.4-201ENST00000425885 253 ntBASIC4.35□□□□□ -1.71
RAE1P78406 COX6CP15-201ENST00000426313 211 ntBASIC4.35□□□□□ -1.71
RAE1P78406 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 RPL7L1P1-201ENST00000448259 785 ntBASIC4.35□□□□□ -1.71
RAE1P78406 MTCO1P27-201ENST00000448269 226 ntBASIC4.35□□□□□ -1.71
RAE1P78406 EIF4A1P11-201ENST00000451239 222 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
RAE1P78406 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 AC011005.3-201ENST00000491624 395 ntBASIC4.35□□□□□ -1.71
RAE1P78406 TMEM251P1-201ENST00000503717 318 ntBASIC4.35□□□□□ -1.71
RAE1P78406 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 AL117351.2-201ENST00000513571 157 ntBASIC4.35□□□□□ -1.71
RAE1P78406 MTND5P4-201ENST00000514978 288 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC104057.1-201ENST00000515547 497 ntBASIC4.35□□□□□ -1.71
RAE1P78406 RNU6-405P-201ENST00000516637 110 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.35□□□□□ -1.71
RAE1P78406 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.35□□□□□ -1.71
RAE1P78406 EIF1P4-201ENST00000572664 335 ntBASIC4.35□□□□□ -1.71
RAE1P78406 LARP7P2-201ENST00000575306 125 ntBASIC4.35□□□□□ -1.71
RAE1P78406 MIR4716-201ENST00000579628 84 ntBASIC4.35□□□□□ -1.71
RAE1P78406 MIR4436B2-201ENST00000581415 91 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.35□□□□□ -1.71
RAE1P78406 MIR4436B1-201ENST00000583272 91 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AL021997.1-201ENST00000605757 193 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC008966.2-201ENST00000606157 453 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC091979.2-201ENST00000607514 214 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
RAE1P78406 AC099842.1-201ENST00000619919 596 ntBASIC4.35□□□□□ -1.71
RAE1P78406 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.35□□□□□ -1.71
RAE1P78406 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.35□□□□□ -1.71
RAE1P78406 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAE1P78406 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
RAE1P78406 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RAE1P78406 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.34□□□□□ -1.71
RAE1P78406 AC125257.1-201ENST00000560400 2930 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms