Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC012442.3-202ENST00000636742 206 ntBASIC3.61□□□□□ -1.83
CDH6P55285 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDH6P55285 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH6P55285 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH6P55285 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH6P55285 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDH6P55285 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 PRRC2CP1-201ENST00000404428 159 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 AC241520.1-201ENST00000422654 1099 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 PSMA2P3-201ENST00000429685 675 ntBASIC3.6□□□□□ -1.83
CDH6P55285 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
CDH6P55285 RPL23AP23-201ENST00000452590 471 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH6P55285 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH6P55285 AC106707.2-201ENST00000484182 374 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC020893.1-201ENST00000502452 580 ntBASIC3.6□□□□□ -1.83
CDH6P55285 SAP18P1-201ENST00000512058 390 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC023141.12-201ENST00000512399 199 ntBASIC3.6□□□□□ -1.83
CDH6P55285 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH6P55285 HMGB1P23-201ENST00000518743 568 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC026403.1-201ENST00000518938 295 ntBASIC3.6□□□□□ -1.83
CDH6P55285 C1DP5-201ENST00000525775 383 ntBASIC3.6□□□□□ -1.83
CDH6P55285 MED28P5-201ENST00000528254 438 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 AC139103.1-201ENST00000534696 1030 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH6P55285 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDH6P55285 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH6P55285 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
CDH6P55285 Z82195.1-201ENST00000604558 398 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC018754.1-201ENST00000607486 925 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AL161637.1-201ENST00000622380 412 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AL034408.1-202ENST00000636088 415 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC083865.1-201ENST00000636634 831 ntBASIC3.6□□□□□ -1.83
CDH6P55285 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
CDH6P55285 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH6P55285 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
CDH6P55285 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH6P55285 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 PTMAP2-201ENST00000397627 327 ntBASIC3.59□□□□□ -1.83
CDH6P55285 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH6P55285 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH6P55285 AL049610.1-201ENST00000423374 372 ntBASIC3.59□□□□□ -1.83
CDH6P55285 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH6P55285 NEK4P1-201ENST00000433383 879 ntBASIC3.59□□□□□ -1.83
CDH6P55285 CDC27P1-201ENST00000445384 715 ntBASIC3.59□□□□□ -1.83
CDH6P55285 RPS15AP29-201ENST00000445539 400 ntBASIC3.59□□□□□ -1.83
CDH6P55285 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH6P55285 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH6P55285 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
CDH6P55285 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
CDH6P55285 SOD1P3-201ENST00000518682 454 ntBASIC3.59□□□□□ -1.83
CDH6P55285 AC103843.2-201ENST00000530523 682 ntBASIC3.59□□□□□ -1.83
CDH6P55285 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH6P55285 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH6P55285 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 AC004775.1-201ENST00000607389 753 ntBASIC3.59□□□□□ -1.83
CDH6P55285 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH6P55285 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH6P55285 AC138915.3-201ENST00000562908 1389 ntBASIC3.59□□□□□ -1.83
CDH6P55285 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH6P55285 AL365440.1-201ENST00000436135 2167 ntBASIC3.59□□□□□ -1.84
CDH6P55285 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH6P55285 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDH6P55285 AL592494.2-201ENST00000425455 1548 ntBASIC3.59□□□□□ -1.84
CDH6P55285 AC032011.1-201ENST00000611703 1549 ntBASIC3.59□□□□□ -1.84
CDH6P55285 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH6P55285 AC007256.1-201ENST00000392253 2765 ntBASIC3.58□□□□□ -1.84
CDH6P55285 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH6P55285 AL512646.1-201ENST00000269395 1077 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms