Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.38□□□□□ -1.71
NR1H2P55055 MIR5186-201ENST00000577504 120 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 SNORA74C-1-201ENST00000580726 201 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.38□□□□□ -1.71
NR1H2P55055 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AL031281.1-201ENST00000604049 488 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AC006270.3-201ENST00000605967 1036 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AC008966.2-201ENST00000606157 453 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AL450489.1-201ENST00000612071 468 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 AC078883.4-201ENST00000623218 367 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 CR381572.1-201ENST00000625098 102 ntBASIC4.38□□□□□ -1.71
NR1H2P55055 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.38□□□□□ -1.71
NR1H2P55055 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
NR1H2P55055 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NR1H2P55055 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H2P55055 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H2P55055 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 MTCO1P14-201ENST00000441695 1559 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 SAMMSON-226ENST00000642089 1582 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 FAM3C2-201ENST00000312214 681 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC067945.1-201ENST00000342609 618 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 Y_RNA.169-201ENST00000363745 96 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RNA5SP505-201ENST00000364748 108 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 Y_RNA.493-201ENST00000384422 102 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RNU6-821P-201ENST00000390995 107 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 HMGB1P17-201ENST00000403495 628 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 MIR1284-201ENST00000408337 120 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RAP1BP1-201ENST00000412709 553 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 COX6CP17-201ENST00000421389 185 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 ART2BP-201ENST00000453501 499 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 snoU13.3-201ENST00000459441 104 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC063943.1-201ENST00000465434 453 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC087312.1-201ENST00000471411 480 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC090013.1-201ENST00000485147 480 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RPS3AP22-201ENST00000488297 769 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RPL23AP72-201ENST00000492447 435 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 RPL5P23-201ENST00000496040 868 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC010350.1-201ENST00000504908 231 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 GAPDHP56-201ENST00000506031 988 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC104090.1-201ENST00000506341 1171 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 OR5M7P-201ENST00000526140 972 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.37□□□□□ -1.71
NR1H2P55055 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1H2P55055 TVP23CP2-201ENST00000571473 623 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 MIR3667-201ENST00000581025 74 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.37□□□□□ -1.71
NR1H2P55055 BNIP3P11-201ENST00000603878 563 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AL133507.1-201ENST00000605269 557 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC245297.2-201ENST00000610119 565 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 MIR6758-201ENST00000620653 63 ntBASIC4.37□□□□□ -1.71
NR1H2P55055 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H2P55055 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H2P55055 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H2P55055 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.36□□□□□ -1.71
NR1H2P55055 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.36□□□□□ -1.71
NR1H2P55055 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NR1H2P55055 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
NR1H2P55055 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NR1H2P55055 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.36□□□□□ -1.71
NR1H2P55055 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 RNVU1-6-201ENST00000364688 164 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NR1H2P55055 RSL24D1P4-201ENST00000400938 484 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 RNA5SP239-201ENST00000410218 129 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms