Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 NF1P5-201ENST00000588287 448 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 U73023.1-201ENST00000603134 700 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC093765.1-201ENST00000603758 881 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC008966.2-201ENST00000606157 453 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AL031666.3-201ENST00000609320 1006 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 RN7SL722P-201ENST00000617780 284 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RN7SL565P-201ENST00000618246 284 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC092650.2-201ENST00000619984 902 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC008443.7-201ENST00000622195 246 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 ERCC6-202ENST00000374127 1782 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
HOXA1P49639 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HOXA1P49639 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 AC067945.1-201ENST00000342609 618 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 RNU6-500P-201ENST00000362349 107 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 Y_RNA.77-201ENST00000362962 107 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 RNU1-85P-201ENST00000364127 164 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 RNU4-24P-201ENST00000364565 139 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 RNU6-921P-201ENST00000384361 107 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 RNU1-82P-201ENST00000390851 165 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC007066.1-201ENST00000392902 381 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 RPL31P52-201ENST00000407532 367 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC114755.2-201ENST00000413520 361 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 ZNF885P-201ENST00000420174 1098 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC098826.1-201ENST00000433943 471 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 LARP1BP3-201ENST00000437229 869 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC241584.1-201ENST00000438469 1241 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AF228730.2-201ENST00000438784 848 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC009961.3-201ENST00000449832 765 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 AL136097.1-201ENST00000456945 913 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 RPL30P9-201ENST00000465586 330 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXA1P49639 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 OR10G5P-201ENST00000532733 358 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA1P49639 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC084824.1-201ENST00000550917 1005 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 GTF2IP22-201ENST00000554443 182 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC015912.2-201ENST00000571053 181 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 LARP7P2-201ENST00000575306 125 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXA1P49639 AC091178.1-203ENST00000584586 279 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA1P49639 RSL24D1P11-201ENST00000591045 491 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA1P49639 HMGB2P1-201ENST00000591146 634 ntBASIC3.77□□□□□ -1.81
HOXA1P49639 AC069304.2-201ENST00000605154 435 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms