Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CCNB2P1-201ENST00000399411 1150 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 HNRNPDP2-201ENST00000406475 478 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 RPL30P2-201ENST00000414021 291 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC092832.1-201ENST00000422934 400 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AC009263.1-201ENST00000441193 1239 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 SETP6-201ENST00000479329 568 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
TNFSF9P41273 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC018797.3-201ENST00000513388 1241 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.57□□□□□ -1.84
TNFSF9P41273 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC110801.1-201ENST00000623590 212 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 AC012020.1-201ENST00000624541 1728 ntBASIC3.57□□□□□ -1.84
TNFSF9P41273 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFSF9P41273 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 RNU4-74P-201ENST00000411280 161 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 RAC1P3-201ENST00000416129 580 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF9P41273 ETF1P3-201ENST00000430422 1160 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF9P41273 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFSF9P41273 SNORD108-201ENST00000459332 71 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 RPL7P47-201ENST00000497299 556 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC021146.1-201ENST00000511202 716 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.56□□□□□ -1.84
TNFSF9P41273 IGLVIV-53-201ENST00000520107 367 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 HAUS1P3-201ENST00000523909 662 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF9P41273 AC012414.2-201ENST00000559474 187 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 AC079880.2-201ENST00000603790 1213 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
TNFSF9P41273 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC005000.2-201ENST00000605468 310 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC242628.1-201ENST00000606810 391 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC009032.1-201ENST00000617574 431 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC243756.2-201ENST00000618406 463 ntBASIC3.56□□□□□ -1.84
TNFSF9P41273 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF9P41273 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TNFSF9P41273 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF9P41273 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
TNFSF9P41273 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF9P41273 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 DCAF13P1-201ENST00000495256 1330 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 AP002088.1-201ENST00000382740 395 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 MIR153-1-201ENST00000384914 90 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 RNA5SP229-201ENST00000410809 99 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 SNRPGP5-201ENST00000456003 220 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 RPL37P6-202ENST00000464216 403 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 AC017015.1-201ENST00000477387 286 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 AC021205.2-201ENST00000480069 347 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF9P41273 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFSF9P41273 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF9P41273 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF9P41273 HIGD1AP1-201ENST00000550979 275 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 MIR5680-201ENST00000577577 84 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFSF9P41273 AC113194.1-201ENST00000606037 500 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 uc_338.1-201ENST00000612113 180 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 CR589904.2-201ENST00000612533 440 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 SNORD39.4-201ENST00000620099 78 ntBASIC3.55□□□□□ -1.84
TNFSF9P41273 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF9P41273 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF9P41273 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AC009501.3-201ENST00000605001 1352 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 HSPA8P1-201ENST00000425843 1833 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF9P41273 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF9P41273 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 248.8 ms