Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MYL8P-204ENST00000431574 518 ntBASIC3.83□□□□□ -1.8
COL18A1P39060 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.83□□□□□ -1.8
COL18A1P39060 HMGN1P18-201ENST00000457642 277 ntBASIC3.83□□□□□ -1.8
COL18A1P39060 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.83□□□□□ -1.8
COL18A1P39060 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.83□□□□□ -1.8
COL18A1P39060 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.83□□□□□ -1.8
COL18A1P39060 AP002812.4-201ENST00000532139 286 ntBASIC3.83□□□□□ -1.8
COL18A1P39060 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.83□□□□□ -1.8
COL18A1P39060 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.83□□□□□ -1.8
COL18A1P39060 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL18A1P39060 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL18A1P39060 AC021755.1-201ENST00000559747 1447 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL18A1P39060 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.82□□□□□ -1.8
COL18A1P39060 RPL7P26-201ENST00000333817 754 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 AC073508.1-201ENST00000428866 656 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 FTH1P1-201ENST00000437933 532 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 RAB28P3-201ENST00000448325 597 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.82□□□□□ -1.8
COL18A1P39060 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 AC006840.1-201ENST00000623069 542 ntBASIC3.82□□□□□ -1.8
COL18A1P39060 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL18A1P39060 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL18A1P39060 AL360182.1-201ENST00000397433 468 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.81□□□□□ -1.8
COL18A1P39060 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.81□□□□□ -1.8
COL18A1P39060 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AP000936.2-201ENST00000447151 681 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.81□□□□□ -1.8
COL18A1P39060 SCGB1D5P-201ENST00000515134 247 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.81□□□□□ -1.8
COL18A1P39060 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL18A1P39060 AC141257.3-201ENST00000572906 215 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AC079089.3-201ENST00000603094 673 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AL035413.2-201ENST00000604801 525 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL18A1P39060 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL18A1P39060 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL18A1P39060 SNORA70B-201ENST00000384210 135 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.81□□□□□ -1.8
COL18A1P39060 FDX1P2-201ENST00000450769 375 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 SEPT7P3-201ENST00000455017 621 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AC090525.1-201ENST00000479116 478 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.81□□□□□ -1.8
COL18A1P39060 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 AL356490.1-201ENST00000623079 479 ntBASIC3.81□□□□□ -1.8
COL18A1P39060 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.81□□□□□ -1.8
COL18A1P39060 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.8□□□□□ -1.8
COL18A1P39060 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 AL365361.1-201ENST00000566942 3481 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 AC027287.1-201ENST00000553115 1453 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 SETP15-201ENST00000412724 337 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 NPM1P11-201ENST00000417106 855 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 AC003685.2-201ENST00000422795 395 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 FAR1P1-201ENST00000427163 934 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 AC117522.3-201ENST00000507974 584 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.8□□□□□ -1.8
COL18A1P39060 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.8□□□□□ -1.8
COL18A1P39060 RMST_8.1-201ENST00000610287 165 ntBASIC3.8□□□□□ -1.8
COL18A1P39060 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
COL18A1P39060 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL18A1P39060 AL139039.1-201ENST00000401900 692 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 AC010095.1-201ENST00000443543 144 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.79□□□□□ -1.8
COL18A1P39060 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.79□□□□□ -1.8
COL18A1P39060 AP001025.2-201ENST00000490908 477 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.79□□□□□ -1.8
COL18A1P39060 AC111000.2-201ENST00000507775 550 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.79□□□□□ -1.8
COL18A1P39060 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
COL18A1P39060 AC027176.1-201ENST00000560204 514 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 AL122125.1-201ENST00000616999 600 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 AL049555.1-201ENST00000562834 1933 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL18A1P39060 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.79□□□□□ -1.8
COL18A1P39060 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COL18A1P39060 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COL18A1P39060 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL18A1P39060 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
COL18A1P39060 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 RNU6-673P-201ENST00000365084 104 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.79□□□□□ -1.8
COL18A1P39060 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL18A1P39060 AC007563.3-201ENST00000433233 371 ntBASIC3.79□□□□□ -1.8
COL18A1P39060 UBL5P3-201ENST00000475112 231 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms