Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RORAP35398 HMGN2P8-201ENST00000391458 268 ntBASIC3.52□□□□□ -1.85
RORAP35398 AL355379.1-201ENST00000405542 640 ntBASIC3.52□□□□□ -1.85
RORAP35398 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 RPL31P2-201ENST00000413849 377 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 OR51AB1P-201ENST00000429046 620 ntBASIC3.52□□□□□ -1.85
RORAP35398 USP9YP31-201ENST00000431405 881 ntBASIC3.52□□□□□ -1.85
RORAP35398 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 BX276092.4-201ENST00000452056 248 ntBASIC3.52□□□□□ -1.85
RORAP35398 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.52□□□□□ -1.85
RORAP35398 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC005726.1-201ENST00000494679 427 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 DUXAP2-201ENST00000519198 589 ntBASIC3.52□□□□□ -1.85
RORAP35398 OR5AK3P-201ENST00000527486 1297 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.52□□□□□ -1.85
RORAP35398 AC090751.1-201ENST00000566966 267 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC020914.6-201ENST00000594327 272 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC090425.2-201ENST00000608818 501 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC019176.2-201ENST00000611579 315 ntBASIC3.52□□□□□ -1.85
RORAP35398 MIR1264-201ENST00000616374 69 ntBASIC3.52□□□□□ -1.85
RORAP35398 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.52□□□□□ -1.85
RORAP35398 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RORAP35398 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RORAP35398 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.52□□□□□ -1.85
RORAP35398 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
RORAP35398 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
RORAP35398 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RORAP35398 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 SNORD46.1-201ENST00000364139 104 ntBASIC3.51□□□□□ -1.85
RORAP35398 SNORA51.2-201ENST00000364595 132 ntBASIC3.51□□□□□ -1.85
RORAP35398 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RORAP35398 RNA5SP424-201ENST00000390988 115 ntBASIC3.51□□□□□ -1.85
RORAP35398 EI24P2-201ENST00000397776 1076 ntBASIC3.51□□□□□ -1.85
RORAP35398 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
RORAP35398 MIR1303-201ENST00000408625 86 ntBASIC3.51□□□□□ -1.85
RORAP35398 RNU2-65P-201ENST00000410162 185 ntBASIC3.51□□□□□ -1.85
RORAP35398 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
RORAP35398 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 HIGD1AP12-201ENST00000427832 281 ntBASIC3.51□□□□□ -1.85
RORAP35398 AC092809.1-201ENST00000441469 474 ntBASIC3.51□□□□□ -1.85
RORAP35398 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
RORAP35398 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.51□□□□□ -1.85
RORAP35398 AC004069.2-201ENST00000505438 1114 ntBASIC3.51□□□□□ -1.85
RORAP35398 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 AC008562.1-201ENST00000521763 330 ntBASIC3.51□□□□□ -1.85
RORAP35398 COX6B1P6-201ENST00000522347 255 ntBASIC3.51□□□□□ -1.85
RORAP35398 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 OR4R3P-201ENST00000525084 838 ntBASIC3.51□□□□□ -1.85
RORAP35398 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.51□□□□□ -1.85
RORAP35398 AC006960.3-201ENST00000561845 705 ntBASIC3.51□□□□□ -1.85
RORAP35398 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.51□□□□□ -1.85
RORAP35398 AC090616.5-202ENST00000582111 297 ntBASIC3.51□□□□□ -1.85
RORAP35398 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.51□□□□□ -1.85
RORAP35398 AC011468.4-201ENST00000603942 409 ntBASIC3.51□□□□□ -1.85
RORAP35398 AL592295.2-201ENST00000612578 206 ntBASIC3.51□□□□□ -1.85
RORAP35398 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 AC015967.1-201ENST00000619893 476 ntBASIC3.51□□□□□ -1.85
RORAP35398 AP006248.3-201ENST00000623580 594 ntBASIC3.51□□□□□ -1.85
RORAP35398 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.51□□□□□ -1.85
RORAP35398 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 U6.107-201ENST00000637108 79 ntBASIC3.51□□□□□ -1.85
RORAP35398 MIR7153-201ENST00000637758 57 ntBASIC3.51□□□□□ -1.85
RORAP35398 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RORAP35398 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
RORAP35398 AL163152.1-201ENST00000642001 374 ntBASIC3.51□□□□□ -1.85
RORAP35398 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.51□□□□□ -1.85
RORAP35398 AC090337.1-201ENST00000579651 2074 ntBASIC3.51□□□□□ -1.85
RORAP35398 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RORAP35398 MTCO1P24-201ENST00000515438 1558 ntBASIC3.51□□□□□ -1.85
RORAP35398 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
RORAP35398 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
RORAP35398 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 SNORA7.2-201ENST00000364446 145 ntBASIC3.5□□□□□ -1.85
RORAP35398 RNU6-796P-201ENST00000391086 107 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms