Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RPL9P32-201ENST00000464118 620 ntBASIC3.31□□□□□ -1.88
RPA3P35244 RPL21P103-201ENST00000479921 488 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
RPA3P35244 SNX5P1-201ENST00000505757 1041 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC090071.1-201ENST00000507713 644 ntBASIC3.31□□□□□ -1.88
RPA3P35244 RN7SKP116-201ENST00000516902 319 ntBASIC3.31□□□□□ -1.88
RPA3P35244 SOD1P3-201ENST00000518682 454 ntBASIC3.31□□□□□ -1.88
RPA3P35244 DUXAP2-201ENST00000519198 589 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC104997.1-201ENST00000519761 717 ntBASIC3.31□□□□□ -1.88
RPA3P35244 IGKV2-36-201ENST00000519999 223 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 OR4R3P-201ENST00000525084 838 ntBASIC3.31□□□□□ -1.88
RPA3P35244 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.31□□□□□ -1.88
RPA3P35244 AC005476.1-201ENST00000554427 397 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
RPA3P35244 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.31□□□□□ -1.88
RPA3P35244 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.31□□□□□ -1.88
RPA3P35244 MIR5186-201ENST00000577504 120 ntBASIC3.31□□□□□ -1.88
RPA3P35244 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 LLPHP1-201ENST00000603571 367 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC015802.5-201ENST00000607478 399 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC105429.2-201ENST00000610567 517 ntBASIC3.31□□□□□ -1.88
RPA3P35244 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC006065.5-201ENST00000623427 349 ntBASIC3.31□□□□□ -1.88
RPA3P35244 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 AC127502.3-201ENST00000636170 1206 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 AC138649.5-201ENST00000637456 137 ntBASIC3.31□□□□□ -1.88
RPA3P35244 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
RPA3P35244 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
RPA3P35244 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
RPA3P35244 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 RNU1-70P-201ENST00000362618 164 ntBASIC3.3□□□□□ -1.88
RPA3P35244 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
RPA3P35244 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
RPA3P35244 AC012065.2-201ENST00000421295 375 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AL160175.1-201ENST00000428124 247 ntBASIC3.3□□□□□ -1.88
RPA3P35244 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.3□□□□□ -1.88
RPA3P35244 AL606490.8-201ENST00000441624 319 ntBASIC3.3□□□□□ -1.88
RPA3P35244 TPTE2P6-202ENST00000445572 1007 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.3□□□□□ -1.88
RPA3P35244 RPL26P28-201ENST00000451325 435 ntBASIC3.3□□□□□ -1.88
RPA3P35244 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.3□□□□□ -1.88
RPA3P35244 HMGB1P5-202ENST00000451497 985 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AP002345.1-201ENST00000456493 928 ntBASIC3.3□□□□□ -1.88
RPA3P35244 SNORA70.14-201ENST00000516205 110 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.3□□□□□ -1.88
RPA3P35244 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RPA3P35244 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RPA3P35244 AL049870.4-201ENST00000555741 486 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AL121594.4-201ENST00000556211 1196 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.3□□□□□ -1.88
RPA3P35244 AC006270.2-201ENST00000578523 652 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
RPA3P35244 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AL355365.1-201ENST00000616480 294 ntBASIC3.3□□□□□ -1.88
RPA3P35244 AC004943.3-201ENST00000624116 600 ntBASIC3.3□□□□□ -1.88
RPA3P35244 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.3□□□□□ -1.88
RPA3P35244 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPA3P35244 MTND5P24-201ENST00000438892 1767 ntBASIC3.3□□□□□ -1.88
RPA3P35244 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPA3P35244 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
RPA3P35244 MTCO1P12-201ENST00000414273 1543 ntBASIC3.29□□□□□ -1.88
RPA3P35244 DDX6P1-205ENST00000441966 1436 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
RPA3P35244 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 MIR23B-201ENST00000384832 97 ntBASIC3.29□□□□□ -1.88
RPA3P35244 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
RPA3P35244 RN7SKP111-201ENST00000410349 271 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
RPA3P35244 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.29□□□□□ -1.88
RPA3P35244 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.29□□□□□ -1.88
RPA3P35244 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPA3P35244 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 RPL21P10-201ENST00000463521 490 ntBASIC3.29□□□□□ -1.88
RPA3P35244 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.29□□□□□ -1.88
RPA3P35244 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
RPA3P35244 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
RPA3P35244 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms