Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC008494.2-201ENST00000514544 370 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 RN7SKP21-201ENST00000516503 220 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 RN7SKP96-201ENST00000516948 297 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AP004371.1-201ENST00000525240 214 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC012414.2-201ENST00000559474 187 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 NTAN1P1-201ENST00000603150 646 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 MTCO3P22-201ENST00000603219 784 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC104820.1-201ENST00000624183 307 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMAP28067 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
HLA-DMAP28067 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMAP28067 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMAP28067 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMAP28067 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 RNU6-98P-201ENST00000384173 107 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 SNORA3.3-201ENST00000408712 125 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 RN7SKP58-201ENST00000411010 305 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 TOMM22P1-201ENST00000418578 312 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 DPPA2P1-201ENST00000428060 556 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 HMGB3P11-201ENST00000440127 604 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 NECAP1P2-201ENST00000455668 727 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 UBDP1-202ENST00000457888 382 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 AC093770.1-201ENST00000511559 571 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 RNU6-760P-201ENST00000516078 97 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 SCARNA14-201ENST00000516903 136 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 YWHAQP7-201ENST00000603536 658 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 AC007566.2-201ENST00000603642 413 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 VIS1.1-201ENST00000610517 203 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 MIR6867-201ENST00000610636 67 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 DDX6P1-205ENST00000441966 1436 ntBASIC3.01□□□□□ -1.93
HLA-DMAP28067 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DMAP28067 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMAP28067 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DMAP28067 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HLA-DMAP28067 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC107081.3-201ENST00000612715 2034 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DMAP28067 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
HLA-DMAP28067 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 AL356095.1-201ENST00000417217 199 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RBMY2KP-201ENST00000418221 992 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DMAP28067 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 GOT2P5-201ENST00000433995 546 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RPL7P29-201ENST00000437151 728 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 HSPE1P28-201ENST00000443139 211 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC091564.1-201ENST00000464563 479 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RPL21P18-201ENST00000469899 480 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC016065.2-201ENST00000514530 444 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RN7SKP13-201ENST00000515933 244 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RNA5SP468-201ENST00000516782 93 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RNU6-352P-201ENST00000516908 107 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 HAUS1P3-201ENST00000523909 662 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DMAP28067 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DMAP28067 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms