Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 CDC42P1-201ENST00000456658 548 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
NCK1P16333 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 AC022034.3-201ENST00000471393 478 ntBASIC3.42□□□□□ -1.86
NCK1P16333 SYPL1P1-201ENST00000473622 768 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 AC112518.2-201ENST00000508565 425 ntBASIC3.42□□□□□ -1.86
NCK1P16333 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.42□□□□□ -1.86
NCK1P16333 RNU6-416P-201ENST00000516265 103 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.42□□□□□ -1.86
NCK1P16333 AP006245.1-201ENST00000522549 120 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC087272.1-201ENST00000523624 533 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.42□□□□□ -1.86
NCK1P16333 AC023824.3-201ENST00000569003 562 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC012182.1-201ENST00000570133 895 ntBASIC3.42□□□□□ -1.86
NCK1P16333 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 AC023575.1-201ENST00000580510 358 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 AC244505.7-201ENST00000599675 272 ntBASIC3.42□□□□□ -1.86
NCK1P16333 BNIP3P38-201ENST00000601117 544 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC133794.1-201ENST00000602731 914 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AL355812.1-201ENST00000603215 216 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC090425.2-201ENST00000608818 501 ntBASIC3.42□□□□□ -1.86
NCK1P16333 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 AL391261.4-201ENST00000616012 481 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AC093875.1-201ENST00000623688 504 ntBASIC3.42□□□□□ -1.86
NCK1P16333 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.42□□□□□ -1.86
NCK1P16333 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
NCK1P16333 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL512283.1-201ENST00000606756 1384 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 ZNF734P-201ENST00000419494 1534 ntBASIC3.41□□□□□ -1.86
NCK1P16333 RNU6-481P-201ENST00000384194 107 ntBASIC3.41□□□□□ -1.86
NCK1P16333 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NCK1P16333 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NCK1P16333 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 AL121972.1-201ENST00000402023 252 ntBASIC3.41□□□□□ -1.86
NCK1P16333 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 AL445183.3-201ENST00000414168 502 ntBASIC3.41□□□□□ -1.86
NCK1P16333 RPL26P29-201ENST00000415623 438 ntBASIC3.41□□□□□ -1.86
NCK1P16333 LIPT1P1-201ENST00000415870 1186 ntBASIC3.41□□□□□ -1.86
NCK1P16333 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 COX6CP17-201ENST00000421389 185 ntBASIC3.41□□□□□ -1.86
NCK1P16333 MTATP6P11-201ENST00000428071 670 ntBASIC3.41□□□□□ -1.86
NCK1P16333 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.41□□□□□ -1.86
NCK1P16333 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.41□□□□□ -1.86
NCK1P16333 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL050341.1-201ENST00000447743 313 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL096803.2-201ENST00000450032 677 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 UBDP1-202ENST00000457888 382 ntBASIC3.41□□□□□ -1.86
NCK1P16333 NDUFA5P9-201ENST00000472609 340 ntBASIC3.41□□□□□ -1.86
NCK1P16333 OR5H3P-201ENST00000502817 919 ntBASIC3.41□□□□□ -1.86
NCK1P16333 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.41□□□□□ -1.86
NCK1P16333 OR4A45P-201ENST00000529954 901 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.41□□□□□ -1.86
NCK1P16333 AC074051.3-201ENST00000570238 358 ntBASIC3.41□□□□□ -1.86
NCK1P16333 MIR3939-201ENST00000582614 106 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AC073592.7-201ENST00000623659 507 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AC020923.1-201ENST00000624021 917 ntBASIC3.41□□□□□ -1.86
NCK1P16333 AC048347.1-201ENST00000624621 427 ntBASIC3.41□□□□□ -1.86
NCK1P16333 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.41□□□□□ -1.86
NCK1P16333 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.41□□□□□ -1.86
NCK1P16333 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NCK1P16333 SGO1P1-201ENST00000603525 1447 ntBASIC3.41□□□□□ -1.86
NCK1P16333 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCK1P16333 AC000367.1-201ENST00000452711 1766 ntBASIC3.4□□□□□ -1.86
NCK1P16333 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
NCK1P16333 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NCK1P16333 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.4□□□□□ -1.86
NCK1P16333 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.86
NCK1P16333 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NCK1P16333 RNU6-619P-201ENST00000365146 108 ntBASIC3.4□□□□□ -1.87
NCK1P16333 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NCK1P16333 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NCK1P16333 RNU6-1226P-201ENST00000384317 107 ntBASIC3.4□□□□□ -1.87
NCK1P16333 RNU6-441P-201ENST00000384545 106 ntBASIC3.4□□□□□ -1.87
NCK1P16333 MIR16-1-201ENST00000385271 89 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms