Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.93□□□□□ -1.62
CFTRP13569 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.93□□□□□ -1.62
CFTRP13569 ASNSP4-201ENST00000511103 447 ntBASIC4.93□□□□□ -1.62
CFTRP13569 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CFTRP13569 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CFTRP13569 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CFTRP13569 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CFTRP13569 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.92□□□□□ -1.62
CFTRP13569 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.92□□□□□ -1.62
CFTRP13569 MIR196B-201ENST00000384852 84 ntBASIC4.92□□□□□ -1.62
CFTRP13569 AL139039.1-201ENST00000401900 692 ntBASIC4.92□□□□□ -1.62
CFTRP13569 U3.42-201ENST00000408746 214 ntBASIC4.92□□□□□ -1.62
CFTRP13569 SMC4P1-201ENST00000414479 527 ntBASIC4.92□□□□□ -1.62
CFTRP13569 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.92□□□□□ -1.62
CFTRP13569 AC007954.1-201ENST00000554198 494 ntBASIC4.92□□□□□ -1.62
CFTRP13569 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.92□□□□□ -1.62
CFTRP13569 MIR7843-201ENST00000622274 79 ntBASIC4.92□□□□□ -1.62
CFTRP13569 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CFTRP13569 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.92□□□□□ -1.62
CFTRP13569 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFTRP13569 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFTRP13569 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFTRP13569 SNORA3.2-201ENST00000408221 125 ntBASIC4.91□□□□□ -1.62
CFTRP13569 AC009963.1-201ENST00000417265 157 ntBASIC4.91□□□□□ -1.62
CFTRP13569 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.91□□□□□ -1.62
CFTRP13569 AC233981.1-201ENST00000423224 461 ntBASIC4.91□□□□□ -1.62
CFTRP13569 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.91□□□□□ -1.62
CFTRP13569 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.91□□□□□ -1.62
CFTRP13569 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFTRP13569 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CFTRP13569 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CFTRP13569 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.91□□□□□ -1.62
CFTRP13569 HSPA8P1-201ENST00000425843 1833 ntBASIC4.9□□□□□ -1.62
CFTRP13569 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CFTRP13569 ZNF658B-202ENST00000615961 3375 ntBASIC4.9□□□□□ -1.62
CFTRP13569 RNA5SP68-201ENST00000363885 119 ntBASIC4.9□□□□□ -1.62
CFTRP13569 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CFTRP13569 AC105402.1-201ENST00000413336 545 ntBASIC4.9□□□□□ -1.62
CFTRP13569 AC003685.2-201ENST00000422795 395 ntBASIC4.9□□□□□ -1.62
CFTRP13569 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.9□□□□□ -1.62
CFTRP13569 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.9□□□□□ -1.62
CFTRP13569 SERPINE4P-201ENST00000554978 281 ntBASIC4.9□□□□□ -1.62
CFTRP13569 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.9□□□□□ -1.62
CFTRP13569 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.9□□□□□ -1.63
CFTRP13569 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.9□□□□□ -1.63
CFTRP13569 MTND5P24-201ENST00000438892 1767 ntBASIC4.9□□□□□ -1.63
CFTRP13569 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CFTRP13569 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CFTRP13569 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CFTRP13569 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CFTRP13569 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CFTRP13569 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.89□□□□□ -1.63
CFTRP13569 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.89□□□□□ -1.63
CFTRP13569 MTND4P26-201ENST00000415971 1359 ntBASIC4.89□□□□□ -1.63
CFTRP13569 AC009313.2-201ENST00000417893 1941 ntBASIC4.89□□□□□ -1.63
CFTRP13569 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CFTRP13569 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.89□□□□□ -1.63
CFTRP13569 AL162389.1-201ENST00000449233 177 ntBASIC4.88□□□□□ -1.63
CFTRP13569 ST13P14-201ENST00000474095 734 ntBASIC4.88□□□□□ -1.63
CFTRP13569 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.88□□□□□ -1.63
CFTRP13569 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.88□□□□□ -1.63
CFTRP13569 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.88□□□□□ -1.63
CFTRP13569 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CFTRP13569 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CFTRP13569 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CFTRP13569 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CFTRP13569 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
CFTRP13569 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CFTRP13569 NECAP1P2-201ENST00000455668 727 ntBASIC4.88□□□□□ -1.63
CFTRP13569 AP002884.2-201ENST00000471647 395 ntBASIC4.88□□□□□ -1.63
CFTRP13569 RPS17P11-201ENST00000474297 293 ntBASIC4.88□□□□□ -1.63
CFTRP13569 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.88□□□□□ -1.63
CFTRP13569 MIR4524B-201ENST00000581569 115 ntBASIC4.88□□□□□ -1.63
CFTRP13569 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFTRP13569 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFTRP13569 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFTRP13569 TOMM20P4-201ENST00000427861 435 ntBASIC4.87□□□□□ -1.63
CFTRP13569 snoU13.26-201ENST00000459452 105 ntBASIC4.87□□□□□ -1.63
CFTRP13569 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.87□□□□□ -1.63
CFTRP13569 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFTRP13569 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CFTRP13569 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.87□□□□□ -1.63
CFTRP13569 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CFTRP13569 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CFTRP13569 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CFTRP13569 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CFTRP13569 AC019072.1-201ENST00000604535 1551 ntBASIC4.86□□□□□ -1.63
CFTRP13569 AC063923.1-201ENST00000478982 1619 ntBASIC4.86□□□□□ -1.63
CFTRP13569 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
CFTRP13569 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CFTRP13569 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CFTRP13569 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.86□□□□□ -1.63
CFTRP13569 snoU13.15-201ENST00000459407 104 ntBASIC4.86□□□□□ -1.63
CFTRP13569 AC010401.1-201ENST00000463867 348 ntBASIC4.86□□□□□ -1.63
CFTRP13569 AC108078.3-201ENST00000502633 489 ntBASIC4.86□□□□□ -1.63
CFTRP13569 AP003122.3-201ENST00000526316 255 ntBASIC4.86□□□□□ -1.63
CFTRP13569 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CFTRP13569 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CFTRP13569 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.85□□□□□ -1.63
CFTRP13569 MIR504-201ENST00000385065 83 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms