Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 RPL31P50-201ENST00000471002 296 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC007336.1-201ENST00000576365 3828 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AC004832.5-201ENST00000608677 401 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 ZNF826P-207ENST00000622273 1910 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A1P12107 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A1P12107 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A1P12107 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A1P12107 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC093909.5-201ENST00000621839 1799 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AL592494.2-201ENST00000425455 1548 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A1P12107 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A1P12107 RPS12P23-201ENST00000419579 400 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 OOSP1P1-201ENST00000423265 274 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC022018.1-201ENST00000430685 241 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AL121890.1-201ENST00000435457 205 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 HMGB3P6-201ENST00000444896 598 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.35□□□□□ -1.87
COL11A1P12107 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC126389.1-201ENST00000477436 290 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC007424.1-203ENST00000554613 687 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A1P12107 AC008121.2-201ENST00000614647 523 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 AL136360.1-201ENST00000503377 1900 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL11A1P12107 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
COL11A1P12107 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL11A1P12107 RNA5SP126-201ENST00000365092 109 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 NPM1P24-201ENST00000428039 894 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.34□□□□□ -1.87
COL11A1P12107 DNAJC19P8-201ENST00000452887 259 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.34□□□□□ -1.87
COL11A1P12107 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AC004924.1-201ENST00000480160 781 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.34□□□□□ -1.87
COL11A1P12107 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL11A1P12107 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.34□□□□□ -1.87
COL11A1P12107 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
COL11A1P12107 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.34□□□□□ -1.87
COL11A1P12107 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.34□□□□□ -1.87
COL11A1P12107 MIR3945-201ENST00000581853 98 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.34□□□□□ -1.87
COL11A1P12107 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL11A1P12107 NRBF2P5-201ENST00000603087 788 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
COL11A1P12107 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL11A1P12107 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.34□□□□□ -1.87
COL11A1P12107 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
COL11A1P12107 AL049555.1-201ENST00000562834 1933 ntBASIC3.34□□□□□ -1.88
COL11A1P12107 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL11A1P12107 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 RNU1-112P-201ENST00000364401 164 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 RPL32P28-201ENST00000443577 397 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A1P12107 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.33□□□□□ -1.88
COL11A1P12107 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A1P12107 RPL23AP92-201ENST00000603609 255 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AL049844.2-201ENST00000604280 628 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AL365503.1-201ENST00000605247 905 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AL008729.2-201ENST00000606393 473 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AC078899.5-201ENST00000612475 178 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AL589935.2-201ENST00000616471 1231 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL11A1P12107 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
COL11A1P12107 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A1P12107 RPS4XP8-201ENST00000402039 771 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.33□□□□□ -1.88
COL11A1P12107 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.33□□□□□ -1.88
COL11A1P12107 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.33□□□□□ -1.88
COL11A1P12107 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A1P12107 AC067852.4-201ENST00000590314 478 ntBASIC3.33□□□□□ -1.88
COL11A1P12107 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A1P12107 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.33□□□□□ -1.88
COL11A1P12107 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL11A1P12107 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A1P12107 AC092111.2-201ENST00000611627 1414 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A1P12107 MIR1183-201ENST00000408856 89 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms