Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HOXC6P09630 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC6P09630 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC6P09630 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC6P09630 AC090312.1-201ENST00000580637 348 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC233702.9-201ENST00000581528 203 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC6P09630 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC6P09630 DPRXP5-201ENST00000604662 539 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC080013.3-201ENST00000606839 578 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC026368.1-201ENST00000614934 690 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 MIR7154-201ENST00000620673 73 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AP001273.1-201ENST00000624493 3152 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC6P09630 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC6P09630 MTND4P5-201ENST00000435821 1374 ntBASIC4.51□□□□□ -1.69
HOXC6P09630 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC6P09630 SPATA2P1-201ENST00000431223 2055 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HOXC6P09630 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXC6P09630 RNU6-543P-201ENST00000362576 108 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 RNU6-525P-201ENST00000363685 104 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 RNA5SP399-201ENST00000364003 117 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 RNU6-413P-201ENST00000384115 107 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 SNORA68.2-201ENST00000391263 128 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 PTMAP5-201ENST00000393073 333 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 ATP5F1P4-201ENST00000397288 746 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 RSL24D1P4-201ENST00000400938 484 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC009237.5-201ENST00000414271 501 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC008280.1-201ENST00000418851 412 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 TIMM9P2-201ENST00000419324 266 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 RPL7P53-201ENST00000421245 739 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC234781.2-201ENST00000426370 994 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC6P09630 MTND1P34-201ENST00000438556 671 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC6P09630 CDC42P1-201ENST00000456658 548 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AL133477.1-201ENST00000457472 514 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 AL133162.1-201ENST00000463228 453 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC6P09630 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 UBE2CP3-201ENST00000502715 450 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC111000.2-201ENST00000507775 550 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC6P09630 RNU6-759P-201ENST00000516740 103 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 IGHV3-63-201ENST00000518422 341 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC022662.1-201ENST00000580252 331 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 NBR2-204ENST00000587322 63 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC6P09630 AC124312.4-201ENST00000605533 310 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 MIR432-201ENST00000606207 94 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AL391497.1-201ENST00000608671 547 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 VN1R74P-201ENST00000613259 503 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 VN1R7P-201ENST00000619242 903 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 AL357559.1-201ENST00000622228 274 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 OR1S1-201ENST00000624470 978 ntBASIC4.5□□□□□ -1.69
HOXC6P09630 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXC6P09630 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
HOXC6P09630 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC6P09630 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC6P09630 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 NACA3P-201ENST00000359690 648 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 SNORD35B-201ENST00000363660 87 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 RNA5SP97-201ENST00000365006 84 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 MIR183-201ENST00000384958 110 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC6P09630 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 AC013404.1-201ENST00000413068 249 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms