Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 AL137849.1-201ENST00000604767 169 ntBASIC3.66□□□□□ -1.82
RETP07949 AC011816.2-201ENST00000607089 556 ntBASIC3.66□□□□□ -1.82
RETP07949 AC084036.1-201ENST00000609190 508 ntBASIC3.66□□□□□ -1.82
RETP07949 AL118556.2-201ENST00000614375 824 ntBASIC3.66□□□□□ -1.82
RETP07949 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RETP07949 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RETP07949 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RETP07949 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RETP07949 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RETP07949 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.65□□□□□ -1.82
RETP07949 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RETP07949 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RETP07949 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RETP07949 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.82
RETP07949 AC007823.1-201ENST00000569932 1566 ntBASIC3.65□□□□□ -1.82
RETP07949 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RETP07949 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RETP07949 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.83
RETP07949 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
RETP07949 OR1AA1P-201ENST00000419597 916 ntBASIC3.65□□□□□ -1.83
RETP07949 USP9YP36-201ENST00000424581 829 ntBASIC3.65□□□□□ -1.83
RETP07949 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.65□□□□□ -1.83
RETP07949 AL606490.7-201ENST00000433136 191 ntBASIC3.65□□□□□ -1.83
RETP07949 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.65□□□□□ -1.83
RETP07949 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RETP07949 AC008481.1-201ENST00000463278 396 ntBASIC3.65□□□□□ -1.83
RETP07949 RPS3AP14-201ENST00000483907 780 ntBASIC3.65□□□□□ -1.83
RETP07949 TRBV12-2-201ENST00000489763 344 ntBASIC3.65□□□□□ -1.83
RETP07949 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RETP07949 HMGB1P21-201ENST00000502313 581 ntBASIC3.65□□□□□ -1.83
RETP07949 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.65□□□□□ -1.83
RETP07949 AC026616.1-201ENST00000523157 525 ntBASIC3.65□□□□□ -1.83
RETP07949 AC008083.2-201ENST00000546707 476 ntBASIC3.65□□□□□ -1.83
RETP07949 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.65□□□□□ -1.83
RETP07949 AL389895.1-201ENST00000554127 252 ntBASIC3.65□□□□□ -1.83
RETP07949 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.65□□□□□ -1.83
RETP07949 AC006504.3-201ENST00000586818 523 ntBASIC3.65□□□□□ -1.83
RETP07949 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.65□□□□□ -1.83
RETP07949 LLPHP1-201ENST00000603571 367 ntBASIC3.65□□□□□ -1.83
RETP07949 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
RETP07949 AC018754.1-201ENST00000607486 925 ntBASIC3.65□□□□□ -1.83
RETP07949 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.65□□□□□ -1.83
RETP07949 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
RETP07949 CEP170P1-201ENST00000502249 4587 ntBASIC3.65□□□□□ -1.83
RETP07949 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RETP07949 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
RETP07949 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.64□□□□□ -1.83
RETP07949 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.64□□□□□ -1.83
RETP07949 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 AL035458.1-201ENST00000433096 585 ntBASIC3.64□□□□□ -1.83
RETP07949 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.64□□□□□ -1.83
RETP07949 RPS20P32-201ENST00000456044 356 ntBASIC3.64□□□□□ -1.83
RETP07949 BTF3P5-201ENST00000457252 467 ntBASIC3.64□□□□□ -1.83
RETP07949 AC084198.1-201ENST00000477747 402 ntBASIC3.64□□□□□ -1.83
RETP07949 RPL21P103-201ENST00000479921 488 ntBASIC3.64□□□□□ -1.83
RETP07949 AC090543.1-201ENST00000492168 485 ntBASIC3.64□□□□□ -1.83
RETP07949 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 RN7SKP82-201ENST00000516786 223 ntBASIC3.64□□□□□ -1.83
RETP07949 RNU6-889P-201ENST00000517189 103 ntBASIC3.64□□□□□ -1.83
RETP07949 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 AC025260.1-201ENST00000548858 430 ntBASIC3.64□□□□□ -1.83
RETP07949 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
RETP07949 EIF4BP1-201ENST00000554881 351 ntBASIC3.64□□□□□ -1.83
RETP07949 AC023158.1-201ENST00000561632 1025 ntBASIC3.64□□□□□ -1.83
RETP07949 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RETP07949 AC135803.1-201ENST00000608748 565 ntBASIC3.64□□□□□ -1.83
RETP07949 AC104820.1-201ENST00000624183 307 ntBASIC3.64□□□□□ -1.83
RETP07949 OR6C71P-202ENST00000641886 1107 ntBASIC3.64□□□□□ -1.83
RETP07949 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
RETP07949 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
RETP07949 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RETP07949 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RETP07949 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RETP07949 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RETP07949 RNU6-666P-201ENST00000363499 107 ntBASIC3.63□□□□□ -1.83
RETP07949 SNORA27.3-201ENST00000364937 134 ntBASIC3.63□□□□□ -1.83
RETP07949 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 OR6K3-202ENST00000368146 996 ntBASIC3.63□□□□□ -1.83
RETP07949 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.63□□□□□ -1.83
RETP07949 MTATP6P19-201ENST00000413797 659 ntBASIC3.63□□□□□ -1.83
RETP07949 RPL30P2-201ENST00000414021 291 ntBASIC3.63□□□□□ -1.83
RETP07949 AL512504.1-201ENST00000415494 778 ntBASIC3.63□□□□□ -1.83
RETP07949 AIMP1P1-201ENST00000418670 937 ntBASIC3.63□□□□□ -1.83
RETP07949 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 RPS15AP29-201ENST00000445539 400 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms