Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.49□□□□□ -1.85
APOEP02649 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.49□□□□□ -1.85
APOEP02649 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.49□□□□□ -1.85
APOEP02649 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.49□□□□□ -1.85
APOEP02649 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
APOEP02649 RN7SL601P-201ENST00000471221 293 ntBASIC3.49□□□□□ -1.85
APOEP02649 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.49□□□□□ -1.85
APOEP02649 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.49□□□□□ -1.85
APOEP02649 AC074250.1-201ENST00000511117 192 ntBASIC3.49□□□□□ -1.85
APOEP02649 FABP5P12-201ENST00000515543 389 ntBASIC3.49□□□□□ -1.85
APOEP02649 RN7SKP116-201ENST00000516902 319 ntBASIC3.49□□□□□ -1.85
APOEP02649 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.49□□□□□ -1.85
APOEP02649 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.49□□□□□ -1.85
APOEP02649 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.49□□□□□ -1.85
APOEP02649 AC015917.1-201ENST00000579654 510 ntBASIC3.49□□□□□ -1.85
APOEP02649 AC008507.1-201ENST00000587506 734 ntBASIC3.49□□□□□ -1.85
APOEP02649 AL355816.1-201ENST00000607951 118 ntBASIC3.49□□□□□ -1.85
APOEP02649 AC005156.1-201ENST00000613371 573 ntBASIC3.49□□□□□ -1.85
APOEP02649 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
APOEP02649 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
APOEP02649 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 U3.19-201ENST00000390893 196 ntBASIC3.48□□□□□ -1.85
APOEP02649 RNU6-244P-201ENST00000391028 104 ntBASIC3.48□□□□□ -1.85
APOEP02649 TAF9BP1-201ENST00000396646 746 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.48□□□□□ -1.85
APOEP02649 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.48□□□□□ -1.85
APOEP02649 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.48□□□□□ -1.85
APOEP02649 CBX1P4-201ENST00000439415 457 ntBASIC3.48□□□□□ -1.85
APOEP02649 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.48□□□□□ -1.85
APOEP02649 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.48□□□□□ -1.85
APOEP02649 AC078817.1-201ENST00000492623 435 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.48□□□□□ -1.85
APOEP02649 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 TXNP6-201ENST00000510190 310 ntBASIC3.48□□□□□ -1.85
APOEP02649 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.48□□□□□ -1.85
APOEP02649 HIGD1AP18-201ENST00000520730 278 ntBASIC3.48□□□□□ -1.85
APOEP02649 AP004242.1-201ENST00000533701 349 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
APOEP02649 OR4T1P-201ENST00000554933 911 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.48□□□□□ -1.85
APOEP02649 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.48□□□□□ -1.85
APOEP02649 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.48□□□□□ -1.85
APOEP02649 CCDC58P3-201ENST00000590792 430 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC010615.3-201ENST00000597319 394 ntBASIC3.48□□□□□ -1.85
APOEP02649 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.48□□□□□ -1.85
APOEP02649 AP003117.2-201ENST00000606010 545 ntBASIC3.48□□□□□ -1.85
APOEP02649 AL159169.3-201ENST00000608871 561 ntBASIC3.48□□□□□ -1.85
APOEP02649 AC055764.2-201ENST00000610089 670 ntBASIC3.48□□□□□ -1.85
APOEP02649 AL356321.1-201ENST00000621360 228 ntBASIC3.48□□□□□ -1.85
APOEP02649 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.48□□□□□ -1.85
APOEP02649 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOEP02649 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOEP02649 RNF6P1-201ENST00000444889 1784 ntBASIC3.48□□□□□ -1.85
APOEP02649 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOEP02649 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOEP02649 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOEP02649 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOEP02649 RNA5SP267-201ENST00000364893 126 ntBASIC3.47□□□□□ -1.85
APOEP02649 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.47□□□□□ -1.85
APOEP02649 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
APOEP02649 RNA5SP44-201ENST00000410446 133 ntBASIC3.47□□□□□ -1.85
APOEP02649 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOEP02649 RPS7P13-201ENST00000413955 498 ntBASIC3.47□□□□□ -1.85
APOEP02649 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.47□□□□□ -1.85
APOEP02649 AL356968.1-201ENST00000416622 474 ntBASIC3.47□□□□□ -1.85
APOEP02649 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.47□□□□□ -1.85
APOEP02649 PLGLA-201ENST00000465668 449 ntBASIC3.47□□□□□ -1.85
APOEP02649 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.47□□□□□ -1.85
APOEP02649 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.47□□□□□ -1.85
APOEP02649 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.47□□□□□ -1.85
APOEP02649 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.47□□□□□ -1.85
APOEP02649 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
APOEP02649 AC023141.12-201ENST00000512399 199 ntBASIC3.47□□□□□ -1.85
APOEP02649 CCNHP1-201ENST00000513311 678 ntBASIC3.47□□□□□ -1.85
APOEP02649 RPL12P22-201ENST00000519073 490 ntBASIC3.47□□□□□ -1.85
APOEP02649 AC008083.2-201ENST00000546707 476 ntBASIC3.47□□□□□ -1.85
APOEP02649 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.47□□□□□ -1.85
APOEP02649 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.47□□□□□ -1.85
APOEP02649 AC005412.1-201ENST00000580812 1049 ntBASIC3.47□□□□□ -1.85
APOEP02649 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.47□□□□□ -1.85
APOEP02649 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.47□□□□□ -1.85
APOEP02649 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.47□□□□□ -1.85
APOEP02649 CR383658.2-201ENST00000547576 1525 ntBASIC3.47□□□□□ -1.85
APOEP02649 MTND5P1-201ENST00000445440 1375 ntBASIC3.47□□□□□ -1.85
APOEP02649 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
APOEP02649 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOEP02649 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.47□□□□□ -1.85
APOEP02649 AL353743.4-201ENST00000422653 1547 ntBASIC3.46□□□□□ -1.86
APOEP02649 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.46□□□□□ -1.86
APOEP02649 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.46□□□□□ -1.86
APOEP02649 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
APOEP02649 RNVU1-14-201ENST00000384770 164 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms