Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.96□□□□□ -1.62
CNOT4O95628 AC022432.1-201ENST00000595739 310 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 AL359999.1-201ENST00000604513 294 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 AC011816.2-201ENST00000607089 556 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 AP001521.1-201ENST00000609150 300 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 MIR6715B-201ENST00000637172 77 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNOT4O95628 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CNOT4O95628 AC004076.2-201ENST00000620532 3323 ntBASIC4.96□□□□□ -1.62
CNOT4O95628 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNOT4O95628 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.96□□□□□ -1.62
CNOT4O95628 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNOT4O95628 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNOT4O95628 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CNOT4O95628 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.96□□□□□ -1.62
CNOT4O95628 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CNOT4O95628 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC138907.8-201ENST00000623981 2256 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CNOT4O95628 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CNOT4O95628 RNA5SP453-201ENST00000362503 119 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 Y_RNA.72-201ENST00000362894 103 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 Y_RNA.86-201ENST00000363020 111 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 RNU6-1227P-201ENST00000383981 107 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 Y_RNA.481-201ENST00000384373 102 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 GLULP6-201ENST00000399502 913 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL590004.1-201ENST00000405321 300 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 MIR320C1-201ENST00000408566 88 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 SNRPEP10-201ENST00000420249 274 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL035410.1-201ENST00000427409 427 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 USP9YP9-201ENST00000429406 715 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 RPS26P56-201ENST00000444468 240 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 RPL5P30-201ENST00000465511 891 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 RPL21P71-201ENST00000465598 459 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 COPS8P2-201ENST00000473228 627 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 RN7SL583P-201ENST00000475692 287 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 MTND1P3-201ENST00000484956 952 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC093270.2-201ENST00000486157 792 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 FGF7P4-201ENST00000509595 295 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC022832.1-201ENST00000530718 645 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC087477.6-201ENST00000559595 843 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 HMGN1P30-201ENST00000589286 268 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL162413.1-201ENST00000603198 110 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL391646.1-201ENST00000603860 190 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 IMMP1LP3-201ENST00000604197 224 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 MIR7155-201ENST00000615925 56 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL023881.1-201ENST00000621088 301 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AC009268.2-201ENST00000621925 457 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 AL596275.2-204ENST00000641628 552 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL596275.2-206ENST00000641957 626 ntBASIC4.95□□□□□ -1.62
CNOT4O95628 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.95□□□□□ -1.62
CNOT4O95628 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CNOT4O95628 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNOT4O95628 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.95□□□□□ -1.62
CNOT4O95628 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC112198.2-201ENST00000426589 6996 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AL592182.3-201ENST00000642132 3304 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms