Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC136624.1-201ENST00000400791 413 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 RPS4XP9-201ENST00000405151 780 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 MIR1250-201ENST00000408098 113 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 P2RY10P2-201ENST00000416730 913 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 RPS27AP7-201ENST00000422792 455 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC005517.2-201ENST00000424673 553 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AL593851.1-201ENST00000426171 157 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 ABCF2P2-201ENST00000450549 296 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 PPIAP3-201ENST00000450588 505 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC009963.2-201ENST00000453431 138 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 RPL35AP15-201ENST00000468042 339 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC010486.2-201ENST00000505572 483 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC093281.2-201ENST00000510153 597 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX2-2O95096 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 PHBP17-201ENST00000528576 541 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-2O95096 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC008015.1-201ENST00000555505 465 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-2O95096 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 MIR4715-201ENST00000584117 79 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 VN1R92P-201ENST00000598511 928 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC006539.2-201ENST00000601729 572 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 uc_338.13-201ENST00000618243 179 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 AC019278.1-201ENST00000623516 479 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC231657.1-201ENST00000624313 397 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 MTCO1P14-201ENST00000441695 1559 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 AC017104.4-201ENST00000636283 1592 ntBASIC4.04□□□□□ -1.76
NKX2-2O95096 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-2O95096 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-2O95096 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-2O95096 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-2O95096 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-2O95096 FAM91A3P-201ENST00000456826 2544 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-2O95096 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-2O95096 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-2O95096 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-2O95096 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NKX2-2O95096 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
NKX2-2O95096 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
NKX2-2O95096 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NKX2-2O95096 MIR331-201ENST00000362302 94 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 RNA5SP175-201ENST00000364275 119 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX2-2O95096 RNA5SP146-201ENST00000410743 123 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-2O95096 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-2O95096 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AC011233.1-201ENST00000422812 283 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 MTND4P20-201ENST00000424125 869 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 AL356276.2-201ENST00000435919 558 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 UBE2D3P1-201ENST00000436669 444 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-2O95096 MTND2P28-201ENST00000457540 1044 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 PLGLA-201ENST00000465668 449 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 NIP7P2-201ENST00000485801 544 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 TMEM251P1-201ENST00000503717 318 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 STMN1P2-201ENST00000508435 439 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 HSPE1P23-201ENST00000509838 286 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-2O95096 MTCO3P44-201ENST00000510977 541 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-2O95096 IGKV2D-36-201ENST00000518643 226 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX2-2O95096 DEFB109D-201ENST00000529497 240 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-2O95096 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-2O95096 AC020914.6-201ENST00000594327 272 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 BNIP3P11-201ENST00000603878 563 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 AC113403.1-201ENST00000604910 193 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 AC090948.1-201ENST00000607464 549 ntBASIC4.03□□□□□ -1.76
NKX2-2O95096 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms