Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC099336.2-201ENST00000422457 254 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 AC091390.3-201ENST00000426478 338 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP200O75643 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP200O75643 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP200O75643 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP200O75643 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP200O75643 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.83□□□□□ -1.96
SNRNP200O75643 OR5G4P-201ENST00000525251 760 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.83□□□□□ -1.96
SNRNP200O75643 AC106782.4-201ENST00000568264 210 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SNRNP200O75643 PLCE1P1-201ENST00000622094 305 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 AC099506.2-201ENST00000623074 221 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP200O75643 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP200O75643 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP200O75643 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNRNP200O75643 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SNRNP200O75643 AC245291.1-201ENST00000419501 328 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 MTCO1P45-201ENST00000431457 267 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 ELOCP23-201ENST00000452014 332 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 RPL5P24-201ENST00000463742 885 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP200O75643 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
SNRNP200O75643 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP200O75643 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP200O75643 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP200O75643 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP200O75643 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP200O75643 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP200O75643 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP200O75643 RNU6-805P-201ENST00000365643 106 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 AC110754.1-201ENST00000399740 601 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 AL031679.1-201ENST00000400616 525 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 AL035551.1-201ENST00000446931 348 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP200O75643 AC068305.1-201ENST00000497406 726 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.82□□□□□ -1.96
SNRNP200O75643 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP200O75643 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP200O75643 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP200O75643 ATP1B3P1-201ENST00000605365 821 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 PWAR6-201ENST00000552334 4618 ntBASIC2.82□□□□□ -1.96
SNRNP200O75643 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP200O75643 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP200O75643 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP200O75643 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SNRNP200O75643 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.81□□□□□ -1.96
SNRNP200O75643 OR5H2-201ENST00000355273 945 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNRNP200O75643 RNA5SP383-201ENST00000362934 120 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 SNORA44-201ENST00000384584 132 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 MTCO3P31-201ENST00000405526 789 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AL445528.1-201ENST00000426330 420 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AC037198.2-201ENST00000478845 733 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP200O75643 RN7SKP34-201ENST00000516142 244 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 IGKV2-23-201ENST00000518729 323 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.81□□□□□ -1.96
SNRNP200O75643 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP200O75643 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP200O75643 IGHV3-29-201ENST00000604817 344 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 uc_338.1-201ENST00000612113 180 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP200O75643 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SNRNP200O75643 MIR512-1-201ENST00000384913 84 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AC006994.1-201ENST00000438212 839 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AP001992.1-205ENST00000462248 379 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
SNRNP200O75643 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP200O75643 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP200O75643 CBX3P5-201ENST00000552017 521 ntBASIC2.81□□□□□ -1.96
SNRNP200O75643 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.81□□□□□ -1.96
SNRNP200O75643 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP200O75643 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP200O75643 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP200O75643 RNU6-525P-201ENST00000363685 104 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNRNP200O75643 RNA5SP107-201ENST00000411358 122 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 HSPE1P22-201ENST00000456856 327 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 AP000926.1-201ENST00000479573 241 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP200O75643 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP200O75643 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP200O75643 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms