Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC008694.2-201ENST00000517591 306 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.88□□□□□ -1.79
PRKNO60260 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 MTCO1P49-201ENST00000523429 802 ntBASIC3.88□□□□□ -1.79
PRKNO60260 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
PRKNO60260 AP001189.2-201ENST00000527320 189 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC135628.1-201ENST00000568867 534 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AC090616.2-202ENST00000584248 222 ntBASIC3.88□□□□□ -1.79
PRKNO60260 MIR4999-201ENST00000585029 91 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 AC067959.1-201ENST00000604334 379 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AL163642.2-201ENST00000604722 1019 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
PRKNO60260 MIR6867-201ENST00000610636 67 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC009090.3-201ENST00000616553 565 ntBASIC3.88□□□□□ -1.79
PRKNO60260 ZYXP1-201ENST00000617638 118 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC073348.1-201ENST00000623002 331 ntBASIC3.88□□□□□ -1.79
PRKNO60260 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 AC068137.4-201ENST00000638485 296 ntBASIC3.88□□□□□ -1.79
PRKNO60260 MIR492-201ENST00000638676 116 ntBASIC3.88□□□□□ -1.79
PRKNO60260 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.88□□□□□ -1.79
PRKNO60260 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 NOL8P1-201ENST00000508336 3529 ntBASIC3.87□□□□□ -1.79
PRKNO60260 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
PRKNO60260 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 RNA5SP130-201ENST00000364431 114 ntBASIC3.87□□□□□ -1.79
PRKNO60260 Y_RNA.311-201ENST00000365068 96 ntBASIC3.87□□□□□ -1.79
PRKNO60260 RNU6-1200P-201ENST00000384162 107 ntBASIC3.87□□□□□ -1.79
PRKNO60260 RNU11-4P-201ENST00000391149 133 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AL136133.1-201ENST00000413694 376 ntBASIC3.87□□□□□ -1.79
PRKNO60260 PRELID3BP11-201ENST00000414230 479 ntBASIC3.87□□□□□ -1.79
PRKNO60260 BOLA3P4-201ENST00000418151 400 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC016907.1-201ENST00000419483 435 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKNO60260 PRELID3BP10-201ENST00000431957 584 ntBASIC3.87□□□□□ -1.79
PRKNO60260 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PRKNO60260 GEMIN8P3-201ENST00000445417 720 ntBASIC3.87□□□□□ -1.79
PRKNO60260 MTCYBP3-201ENST00000445588 1137 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKNO60260 RPS7P7-201ENST00000463499 571 ntBASIC3.87□□□□□ -1.79
PRKNO60260 MTND3P7-201ENST00000474435 343 ntBASIC3.87□□□□□ -1.79
PRKNO60260 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKNO60260 AC111000.2-201ENST00000507775 550 ntBASIC3.87□□□□□ -1.79
PRKNO60260 KRT19P6-201ENST00000510983 209 ntBASIC3.87□□□□□ -1.79
PRKNO60260 RPL7L1P13-201ENST00000511702 739 ntBASIC3.87□□□□□ -1.79
PRKNO60260 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKNO60260 RN7SKP31-201ENST00000516354 278 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKNO60260 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKNO60260 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKNO60260 PDCD5P1-201ENST00000543528 309 ntBASIC3.87□□□□□ -1.79
PRKNO60260 UBE2NP1-201ENST00000545592 458 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKNO60260 AC008687.2-201ENST00000597865 520 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC103881.1-201ENST00000603476 538 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC072039.2-201ENST00000608883 439 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC064801.1-201ENST00000612025 407 ntBASIC3.87□□□□□ -1.79
PRKNO60260 AC023043.4-201ENST00000612081 449 ntBASIC3.87□□□□□ -1.79
PRKNO60260 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 AL354976.1-201ENST00000613843 387 ntBASIC3.87□□□□□ -1.79
PRKNO60260 RNA5SP196-201ENST00000625967 102 ntBASIC3.87□□□□□ -1.79
PRKNO60260 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PRKNO60260 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKNO60260 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKNO60260 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 AC017104.4-201ENST00000636283 1592 ntBASIC3.86□□□□□ -1.79
PRKNO60260 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 SCN1A-220ENST00000641603 12506 ntBASIC3.86□□□□□ -1.79
PRKNO60260 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
PRKNO60260 RNU6-492P-201ENST00000363035 104 ntBASIC3.86□□□□□ -1.79
PRKNO60260 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 RNU5A-2P-201ENST00000384337 116 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 RPS23P10-201ENST00000416185 486 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AL356095.1-201ENST00000417217 199 ntBASIC3.86□□□□□ -1.79
PRKNO60260 BX119904.4-201ENST00000424402 301 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC009965.2-201ENST00000425328 970 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AL390023.1-201ENST00000428836 262 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 ARL4AP3-201ENST00000441452 574 ntBASIC3.86□□□□□ -1.79
PRKNO60260 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 AL606662.1-201ENST00000445763 553 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC114755.5-201ENST00000447760 831 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 NF1P3-201ENST00000457709 450 ntBASIC3.86□□□□□ -1.79
PRKNO60260 RNA5SP246-201ENST00000458909 119 ntBASIC3.86□□□□□ -1.79
PRKNO60260 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms