Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.14□□□□□ -1.91
SGCEO43556 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.14□□□□□ -1.91
SGCEO43556 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 RPL5P24-201ENST00000463742 885 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RPL7P5-201ENST00000471472 736 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AC126121.1-201ENST00000482313 553 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RPS3AP50-201ENST00000487064 803 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 HIGD1AP3-201ENST00000515857 278 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RN7SKP244-201ENST00000516513 307 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RPL12P22-201ENST00000519073 490 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RANP9-201ENST00000519957 271 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AC104115.2-201ENST00000523026 687 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 AC011602.1-201ENST00000546484 331 ntBASIC3.14□□□□□ -1.91
SGCEO43556 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
SGCEO43556 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
SGCEO43556 BNIP3P7-201ENST00000605641 516 ntBASIC3.14□□□□□ -1.91
SGCEO43556 U73479.1-201ENST00000618062 168 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
SGCEO43556 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SGCEO43556 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SGCEO43556 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SGCEO43556 AC116096.1-201ENST00000566804 2314 ntBASIC3.14□□□□□ -1.91
SGCEO43556 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
SGCEO43556 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
SGCEO43556 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 SNORD3H-201ENST00000384486 214 ntBASIC3.13□□□□□ -1.91
SGCEO43556 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SGCEO43556 DHFRP5-201ENST00000406944 564 ntBASIC3.13□□□□□ -1.91
SGCEO43556 MIR1303-201ENST00000408625 86 ntBASIC3.13□□□□□ -1.91
SGCEO43556 RN7SKP159-201ENST00000410657 292 ntBASIC3.13□□□□□ -1.91
SGCEO43556 RNU2-71P-201ENST00000411395 189 ntBASIC3.13□□□□□ -1.91
SGCEO43556 ATP5A1P2-201ENST00000412323 255 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 VDAC1P3-201ENST00000434069 851 ntBASIC3.13□□□□□ -1.91
SGCEO43556 NOTCH2P1-201ENST00000443481 624 ntBASIC3.13□□□□□ -1.91
SGCEO43556 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC089999.1-201ENST00000460336 374 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AC090543.1-201ENST00000492168 485 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AC108157.1-201ENST00000510511 539 ntBASIC3.13□□□□□ -1.91
SGCEO43556 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 MTCYBP41-201ENST00000528913 1123 ntBASIC3.13□□□□□ -1.91
SGCEO43556 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCEO43556 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCEO43556 AC005972.3-201ENST00000606304 481 ntBASIC3.13□□□□□ -1.91
SGCEO43556 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
SGCEO43556 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 LINC00216-201ENST00000623548 1126 ntBASIC3.13□□□□□ -1.91
SGCEO43556 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCEO43556 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCEO43556 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCEO43556 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 RNA5SP51-201ENST00000364750 119 ntBASIC3.12□□□□□ -1.91
SGCEO43556 SNORA73.2-201ENST00000364946 201 ntBASIC3.12□□□□□ -1.91
SGCEO43556 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 MIR142-201ENST00000384835 87 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL445189.1-201ENST00000405722 338 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL138880.1-201ENST00000405824 642 ntBASIC3.12□□□□□ -1.91
SGCEO43556 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
SGCEO43556 CYCSP19-201ENST00000411715 316 ntBASIC3.12□□□□□ -1.91
SGCEO43556 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
SGCEO43556 MTCYBP24-201ENST00000420387 1106 ntBASIC3.12□□□□□ -1.91
SGCEO43556 SDCBPP2-201ENST00000424643 885 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AC005517.2-201ENST00000424673 553 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL445528.1-201ENST00000426330 420 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.12□□□□□ -1.91
SGCEO43556 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AL590103.1-201ENST00000434488 307 ntBASIC3.12□□□□□ -1.91
SGCEO43556 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 MRPS33P4-201ENST00000434892 317 ntBASIC3.12□□□□□ -1.91
SGCEO43556 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms