Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 AC007529.1-201ENST00000418574 2178 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 AC087359.1-201ENST00000508335 1740 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMAD6O43541 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.37□□□□□ -1.71
SMAD6O43541 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 RNA5SP27-201ENST00000363839 119 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 snoZ40.1-201ENST00000364540 72 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 MT-TH-201ENST00000387441 69 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 MIR1911-201ENST00000410783 80 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AL663109.1-201ENST00000411498 844 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 HMGB3P31-201ENST00000413333 595 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.37□□□□□ -1.71
SMAD6O43541 MTCO2P34-201ENST00000421994 607 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 NEK4P1-201ENST00000433383 879 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.37□□□□□ -1.71
SMAD6O43541 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 MTND3P1-201ENST00000441336 220 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.37□□□□□ -1.71
SMAD6O43541 MTCYBP1-201ENST00000454315 1119 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.37□□□□□ -1.71
SMAD6O43541 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMAD6O43541 AC108022.1-201ENST00000493466 478 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 DSTNP2-201ENST00000504533 515 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.37□□□□□ -1.71
SMAD6O43541 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 AC018797.3-201ENST00000513388 1241 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 SNORA31.9-201ENST00000516429 84 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 RNA5SP519-201ENST00000516480 119 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 IGKV2D-10-201ENST00000520194 281 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AC022790.1-201ENST00000522872 204 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 OR5G4P-201ENST00000525251 760 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMAD6O43541 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 TVP23BP1-201ENST00000557500 617 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 EIF1P4-201ENST00000572664 335 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 ISCA1P3-201ENST00000577104 373 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AC022146.1-201ENST00000595307 847 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.37□□□□□ -1.71
SMAD6O43541 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.37□□□□□ -1.71
SMAD6O43541 AC125494.3-201ENST00000602759 455 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AL357078.3-201ENST00000607528 618 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AC109347.2-201ENST00000610220 349 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AC109454.4-201ENST00000623411 649 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 RPL23AP61-201ENST00000623642 466 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 AL356121.2-201ENST00000624715 780 ntBASIC4.37□□□□□ -1.71
SMAD6O43541 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
SMAD6O43541 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SMAD6O43541 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.37□□□□□ -1.71
SMAD6O43541 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMAD6O43541 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.37□□□□□ -1.71
SMAD6O43541 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMAD6O43541 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SMAD6O43541 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.36□□□□□ -1.71
SMAD6O43541 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMAD6O43541 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SMAD6O43541 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.36□□□□□ -1.71
SMAD6O43541 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC000367.1-201ENST00000452711 1766 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMAD6O43541 MIR383-201ENST00000362257 73 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 RNA5SP502-201ENST00000362694 119 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 RNU1-14P-201ENST00000362759 152 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.36□□□□□ -1.71
SMAD6O43541 Y_RNA.516-201ENST00000384541 124 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.36□□□□□ -1.71
SMAD6O43541 AL079342.2-201ENST00000403367 482 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 RNU2-16P-201ENST00000410712 136 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.36□□□□□ -1.71
SMAD6O43541 FCF1P9-201ENST00000412546 282 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC027644.1-201ENST00000419595 298 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
SMAD6O43541 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AL512326.1-201ENST00000443050 721 ntBASIC4.36□□□□□ -1.71
SMAD6O43541 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.36□□□□□ -1.71
SMAD6O43541 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.36□□□□□ -1.71
SMAD6O43541 AC009963.2-201ENST00000453431 138 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms