Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RAB11AP1-201ENST00000442978 646 ntBASIC4.69□□□□□ -1.66
PROM1O43490 EEF1E1P1-201ENST00000446998 430 ntBASIC4.69□□□□□ -1.66
PROM1O43490 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 SLC31A1P1-201ENST00000451221 567 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 CYCSP34-201ENST00000458172 304 ntBASIC4.69□□□□□ -1.66
PROM1O43490 KLF3P2-201ENST00000465138 268 ntBASIC4.69□□□□□ -1.66
PROM1O43490 RN7SL319P-201ENST00000480656 221 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AL358832.1-201ENST00000497800 389 ntBASIC4.69□□□□□ -1.66
PROM1O43490 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.69□□□□□ -1.66
PROM1O43490 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.69□□□□□ -1.66
PROM1O43490 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PROM1O43490 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 RN7SKP244-201ENST00000516513 307 ntBASIC4.69□□□□□ -1.66
PROM1O43490 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 AC027309.2-201ENST00000520566 192 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 DEFB108A-201ENST00000530110 222 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC079075.1-201ENST00000559543 878 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.69□□□□□ -1.66
PROM1O43490 NF1P5-201ENST00000588287 448 ntBASIC4.69□□□□□ -1.66
PROM1O43490 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.69□□□□□ -1.66
PROM1O43490 AC104687.2-201ENST00000604442 342 ntBASIC4.69□□□□□ -1.66
PROM1O43490 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC098614.4-201ENST00000607601 462 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC069234.5-201ENST00000611056 416 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.69□□□□□ -1.66
PROM1O43490 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.69□□□□□ -1.66
PROM1O43490 AC026634.1-201ENST00000634369 198 ntBASIC4.69□□□□□ -1.66
PROM1O43490 OR5AK4P-201ENST00000635912 903 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AC099654.13-201ENST00000639774 207 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AL596275.2-204ENST00000641628 552 ntBASIC4.69□□□□□ -1.66
PROM1O43490 AL596275.2-206ENST00000641957 626 ntBASIC4.69□□□□□ -1.66
PROM1O43490 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PROM1O43490 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PROM1O43490 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PROM1O43490 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 RNU6-216P-201ENST00000363282 104 ntBASIC4.68□□□□□ -1.66
PROM1O43490 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.68□□□□□ -1.66
PROM1O43490 RNU5A-6P-201ENST00000384136 116 ntBASIC4.68□□□□□ -1.66
PROM1O43490 RNU6-1151P-201ENST00000384684 107 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AF186996.5-201ENST00000418098 904 ntBASIC4.68□□□□□ -1.66
PROM1O43490 OFD1P18Y-201ENST00000420889 959 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC104837.2-201ENST00000427236 424 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC073335.1-201ENST00000427776 363 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.68□□□□□ -1.66
PROM1O43490 UBE2V1P8-201ENST00000437166 265 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.68□□□□□ -1.66
PROM1O43490 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 RPL26P28-201ENST00000451325 435 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 RPS3AP41-201ENST00000462701 778 ntBASIC4.68□□□□□ -1.66
PROM1O43490 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.68□□□□□ -1.66
PROM1O43490 AC116353.2-201ENST00000505332 712 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC025674.1-201ENST00000507074 324 ntBASIC4.68□□□□□ -1.66
PROM1O43490 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM1O43490 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 AF131216.2-201ENST00000512316 564 ntBASIC4.68□□□□□ -1.66
PROM1O43490 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.68□□□□□ -1.66
PROM1O43490 MTND5P4-201ENST00000514978 288 ntBASIC4.68□□□□□ -1.66
PROM1O43490 RNU6-583P-201ENST00000516012 92 ntBASIC4.68□□□□□ -1.66
PROM1O43490 RNU6-314P-201ENST00000516574 104 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.68□□□□□ -1.66
PROM1O43490 MED28P5-201ENST00000528254 438 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.68□□□□□ -1.66
PROM1O43490 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.68□□□□□ -1.66
PROM1O43490 AC092325.1-201ENST00000566449 554 ntBASIC4.68□□□□□ -1.66
PROM1O43490 TVP23CP2-201ENST00000571473 623 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 MIR548S-201ENST00000581352 82 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC087283.1-201ENST00000604029 1074 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AF250324.2-201ENST00000608299 610 ntBASIC4.68□□□□□ -1.66
PROM1O43490 SNORD91B-202ENST00000608459 222 ntBASIC4.68□□□□□ -1.66
PROM1O43490 AC103710.4-201ENST00000609301 899 ntBASIC4.68□□□□□ -1.66
PROM1O43490 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.68□□□□□ -1.66
PROM1O43490 EIF3FP1-201ENST00000613970 806 ntBASIC4.68□□□□□ -1.66
PROM1O43490 uc_338.18-201ENST00000615451 175 ntBASIC4.68□□□□□ -1.66
PROM1O43490 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PROM1O43490 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms