Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 VN1R34P-201ENST00000447387 883 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AC073387.1-201ENST00000453261 709 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 MTCO3P16-201ENST00000454456 754 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 HIGD1AP3-201ENST00000515857 278 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 RN7SKP157-201ENST00000516174 282 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 IGKV2D-23-201ENST00000518179 286 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 AL121576.1-201ENST00000556055 276 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN3O15551 MIR4444-1-201ENST00000581696 74 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 MIR4444-2-201ENST00000584390 74 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AC006116.10-201ENST00000591836 581 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN3O15551 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 OR8B1P-202ENST00000641132 1178 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC011978.2-201ENST00000569835 2054 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AC008432.1-201ENST00000615912 1320 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC007656.2-201ENST00000624902 4547 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN3O15551 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN3O15551 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN3O15551 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN3O15551 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLDN3O15551 SNORD56.4-201ENST00000363883 71 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 MIR23B-201ENST00000384832 97 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 PTP4A1P5-201ENST00000420305 455 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 CYCSP4-201ENST00000429682 331 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 RPL36P19-201ENST00000430744 301 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 UBE2V1P1-201ENST00000430836 445 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 AL050321.1-201ENST00000432363 400 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 Z77249.1-201ENST00000444622 1175 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 HMGN2P21-201ENST00000447764 270 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 RPL7P55-201ENST00000450522 746 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN3O15551 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 AC006499.5-201ENST00000505037 514 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 HMGN1P15-201ENST00000513870 295 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 RNU6-202P-201ENST00000515998 96 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 IGKV2D-19-201ENST00000523346 262 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN3O15551 AC095057.3-201ENST00000567102 1157 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN3O15551 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN3O15551 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN3O15551 MFSD8-213ENST00000641134 1327 ntBASIC3.92□□□□□ -1.78
CLDN3O15551 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN3O15551 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 MIR670-201ENST00000390142 98 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN3O15551 AL391417.1-201ENST00000404100 426 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AL445183.3-201ENST00000414168 502 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 RPS29P4-201ENST00000414733 161 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC069157.1-201ENST00000421749 137 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 SDCBPP2-201ENST00000424643 885 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 MTCO1P43-201ENST00000431831 488 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 BMS1P19-201ENST00000433925 393 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN3O15551 RPL6P5-201ENST00000445678 828 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 PDSS1P2-201ENST00000449397 678 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 TVP23BP2-201ENST00000455082 615 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 RPL5P23-201ENST00000496040 868 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN3O15551 AC016065.2-201ENST00000514530 444 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN3O15551 RN7SKP13-201ENST00000515933 244 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 RNU6-579P-201ENST00000516879 102 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 SOD1P3-201ENST00000518682 454 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC087272.1-201ENST00000523624 533 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC008489.1-201ENST00000524271 483 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 OR8I1P-201ENST00000529291 931 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms