Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 AL590240.1-201ENST00000334118 313 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 RNU6-451P-201ENST00000362921 107 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 U3.10-201ENST00000364459 214 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 RNY4P34-201ENST00000364779 95 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 RNU6-809P-201ENST00000384461 107 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC073136.2-201ENST00000417282 849 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 FCF1P1-201ENST00000432690 571 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC002486.1-201ENST00000435098 391 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC009961.2-201ENST00000435771 251 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC005154.2-201ENST00000438110 379 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.38□□□□□ -1.55
RFXAPO00287 BRK1P2-201ENST00000442875 223 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.38□□□□□ -1.55
RFXAPO00287 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.38□□□□□ -1.55
RFXAPO00287 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.38□□□□□ -1.55
RFXAPO00287 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.38□□□□□ -1.55
RFXAPO00287 AC037471.2-201ENST00000564941 598 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 VN1R80P-201ENST00000597126 338 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 NRBF2P5-201ENST00000603087 788 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 RNU6-88P-201ENST00000606801 100 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC090425.1-201ENST00000610007 140 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 AL603758.1-201ENST00000618654 241 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC009268.2-201ENST00000621925 457 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.38□□□□□ -1.55
RFXAPO00287 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 MTND5P1-201ENST00000445440 1375 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFXAPO00287 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFXAPO00287 DHX40P1-201ENST00000588725 1412 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RFXAPO00287 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.38□□□□□ -1.55
RFXAPO00287 CCT8P1-201ENST00000413611 1657 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.37□□□□□ -1.55
RFXAPO00287 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.37□□□□□ -1.55
RFXAPO00287 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.37□□□□□ -1.55
RFXAPO00287 SDCBPP2-201ENST00000424643 885 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.37□□□□□ -1.55
RFXAPO00287 HSPE1P16-201ENST00000426640 348 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 BX890604.2-201ENST00000427883 474 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 SAR1AP4-201ENST00000429225 591 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AC108059.2-201ENST00000434626 151 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.37□□□□□ -1.55
RFXAPO00287 AL590365.1-201ENST00000450788 243 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AL121877.1-201ENST00000453704 622 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 C1DP4-201ENST00000455429 424 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RNA5SP464-201ENST00000516251 108 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AC022878.1-201ENST00000530684 149 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AC243972.3-201ENST00000539655 198 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.37□□□□□ -1.55
RFXAPO00287 AL390334.1-201ENST00000556395 450 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 NPM1P42-201ENST00000560329 862 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.37□□□□□ -1.55
RFXAPO00287 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 AC138915.2-201ENST00000569776 97 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RN7SL690P-201ENST00000582087 240 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 MIR3171-201ENST00000584270 74 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 MIR92B-201ENST00000607575 96 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 AP005432.2-201ENST00000608162 586 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFXAPO00287 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 AC000095.2-202ENST00000637415 154 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 AL122126.1-201ENST00000546905 1318 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 AC004076.2-201ENST00000620532 3323 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 AC066616.2-201ENST00000559334 1481 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
RFXAPO00287 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFXAPO00287 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFXAPO00287 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.37□□□□□ -1.55
RFXAPO00287 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RFXAPO00287 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.37□□□□□ -1.55
RFXAPO00287 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFXAPO00287 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms