Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SNORD56.3-201ENST00000363507 71 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 RNU1-64P-201ENST00000365443 163 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 BX664727.1-201ENST00000416024 466 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC009965.2-201ENST00000425328 970 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC105402.2-201ENST00000438503 358 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC122718.1-201ENST00000439448 744 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 RRM2P4-201ENST00000441721 562 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC125238.1-201ENST00000448842 249 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 MTATP6P14-201ENST00000455189 673 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 FAM133DP-201ENST00000464802 691 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 RN7SL132P-201ENST00000478131 296 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC006518.1-201ENST00000541449 943 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC025918.2-201ENST00000558683 763 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC023825.1-201ENST00000566704 1030 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC093227.2-201ENST00000589357 285 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AP003117.1-201ENST00000602771 554 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC009948.4-201ENST00000604692 675 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AL391834.2-201ENST00000609982 546 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC104763.3-201ENST00000613765 618 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC010608.3-201ENST00000625048 527 ntBASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM49D1C9J1S8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 RNA5SP197-201ENST00000363357 119 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC025750.1-201ENST00000399891 379 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 RNA5SP293-201ENST00000410527 113 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 RPL30P3-201ENST00000424262 333 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC006994.1-201ENST00000438212 839 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 SNRPGP5-201ENST00000456003 220 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AP000893.1-201ENST00000474462 794 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC121161.1-201ENST00000510606 652 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 SNORA31.13-201ENST00000516624 135 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AP003355.1-201ENST00000518956 587 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 CIR1P1-201ENST00000524055 1133 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AP000916.1-201ENST00000533869 835 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC010591.1-201ENST00000603941 649 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AL161637.1-201ENST00000622380 412 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AL049777.1-201ENST00000622740 518 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AC004943.3-201ENST00000624116 600 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
TRIM49D1C9J1S8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 RAD1P1-201ENST00000231383 813 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 RPL7P26-201ENST00000333817 754 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 U3.15-201ENST00000365398 212 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 MIR134-201ENST00000385258 73 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL445189.1-201ENST00000405722 338 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 RNU4-74P-201ENST00000411280 161 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 RPL7P2-201ENST00000427639 268 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 ETF1P3-201ENST00000430422 1160 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL359073.1-201ENST00000448036 403 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 FCF1P6-201ENST00000456841 595 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 HMGB1P38-201ENST00000490557 577 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms