Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU2-6P-201ENST00000411404 190 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 RPS12P5-201ENST00000423449 371 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL591503.2-201ENST00000442314 1005 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 NDUFS5P3-201ENST00000450668 321 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 RN7SL807P-201ENST00000470923 297 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC015908.1-201ENST00000478739 476 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 RPL21P47-201ENST00000483696 477 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 PRELID3BP7-201ENST00000503606 469 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 RNU6-334P-201ENST00000517072 102 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC022790.1-201ENST00000522872 204 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 MIR4276-201ENST00000584832 70 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 ABI1P1-201ENST00000603375 1120 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 AP000720.1-201ENST00000625091 483 ntBASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 SNORD56.4-201ENST00000363883 71 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MTATP6P31-201ENST00000406985 692 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MIR1303-201ENST00000408625 86 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 HMGN1P24-201ENST00000412282 298 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 Z99755.1-201ENST00000414048 380 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 RPS24P8-201ENST00000431490 402 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 RPL23AP83-201ENST00000434984 473 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 RPL7P55-201ENST00000450522 746 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 RPL32P14-201ENST00000463196 378 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 S100A11P1-201ENST00000477525 312 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 CAB39P1-201ENST00000502277 460 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC021678.1-201ENST00000505195 936 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC112198.1-201ENST00000505369 1220 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC121161.1-201ENST00000510606 652 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 IGKV2-36-201ENST00000519999 223 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC113192.3-201ENST00000529152 742 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 UBE2NP1-201ENST00000545592 458 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MTND4LP24-201ENST00000572277 291 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MIR4458-201ENST00000578872 75 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC010680.3-201ENST00000604215 520 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC026741.1-201ENST00000605892 482 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AC006946.3-201ENST00000609791 756 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MIR7112-201ENST00000616126 65 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MIR3651-201ENST00000630427 90 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 AL139811.1-201ENST00000424779 2299 ntBASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMIM28A0A1B0GU29 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC090229.1-201ENST00000590983 1609 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 PNPT1P2-201ENST00000456768 2050 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms