Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
PdfS4R2K0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.65□□□□□ -0.38
PdfS4R2K0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
PdfS4R2K0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.65□□□□□ -0.38
PdfS4R2K0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.65□□□□□ -0.38
PdfS4R2K0 Gm18666-201ENSMUST00000190039 958 ntBASIC12.65□□□□□ -0.38
PdfS4R2K0 Gm37856-201ENSMUST00000191634 999 ntBASIC12.65□□□□□ -0.38
PdfS4R2K0 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.65□□□□□ -0.38
PdfS4R2K0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.65□□□□□ -0.38
PdfS4R2K0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PdfS4R2K0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
PdfS4R2K0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.64□□□□□ -0.39
PdfS4R2K0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Dio3-201ENSMUST00000097228 1449 ntBASIC12.64□□□□□ -0.39
PdfS4R2K0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PdfS4R2K0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.64□□□□□ -0.39
PdfS4R2K0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.64□□□□□ -0.39
PdfS4R2K0 Gm13168-201ENSMUST00000121771 632 ntBASIC12.64□□□□□ -0.39
PdfS4R2K0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PdfS4R2K0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PdfS4R2K0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Flg-201ENSMUST00000050758 1488 ntBASIC12.64□□□□□ -0.39
PdfS4R2K0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdfS4R2K0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Gm12896-201ENSMUST00000118430 226 ntBASIC12.63□□□□□ -0.39
PdfS4R2K0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.63□□□□□ -0.39
PdfS4R2K0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdfS4R2K0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
PdfS4R2K0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PdfS4R2K0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
PdfS4R2K0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdfS4R2K0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PdfS4R2K0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdfS4R2K0 Gm2399-201ENSMUST00000104944 225 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms