Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1aQ921W0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Gm4974-201ENSMUST00000209974 875 ntBASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1aQ921W0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1aQ921W0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1aQ921W0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1aQ921W0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1aQ921W0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1aQ921W0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1aQ921W0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms