Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Gm6659-201ENSMUST00000174752 547 ntBASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Gm18115-201ENSMUST00000221209 621 ntBASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rfwd3Q8CIK8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfwd3Q8CIK8 Phf7-203ENSMUST00000226565 1971 ntBASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfwd3Q8CIK8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Gm11355-201ENSMUST00000121120 306 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms