Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Z85996.1-201ENST00000494644 937 ntBASIC17.62■□□□□ 0.41
RFC3P40938 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFC3P40938 C2orf69P3-201ENST00000565542 1120 ntBASIC17.62■□□□□ 0.41
RFC3P40938 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.62■□□□□ 0.41
RFC3P40938 DGCR10-201ENST00000609839 495 ntBASIC17.62■□□□□ 0.41
RFC3P40938 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC3P40938 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RFC3P40938 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFC3P40938 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.62■□□□□ 0.41
RFC3P40938 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC3P40938 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
RFC3P40938 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RFC3P40938 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 INGX-201ENST00000359239 846 ntBASIC17.61■□□□□ 0.41
RFC3P40938 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RFC3P40938 AC113347.1-201ENST00000413321 391 ntBASIC17.61■□□□□ 0.41
RFC3P40938 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC3P40938 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC3P40938 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC3P40938 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC3P40938 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.61■□□□□ 0.41
RFC3P40938 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC3P40938 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RFC3P40938 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC3P40938 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RFC3P40938 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.6■□□□□ 0.41
RFC3P40938 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RFC3P40938 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC3P40938 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC3P40938 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.6■□□□□ 0.41
RFC3P40938 AL137013.1-201ENST00000432946 1228 ntBASIC17.6■□□□□ 0.41
RFC3P40938 MFAP1P1-201ENST00000442257 1255 ntBASIC17.6■□□□□ 0.41
RFC3P40938 SLC25A3P1-201ENST00000443844 931 ntBASIC17.6■□□□□ 0.41
RFC3P40938 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC3P40938 AL160286.2-201ENST00000567150 934 ntBASIC17.6■□□□□ 0.41
RFC3P40938 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 AP005242.2-201ENST00000580065 1175 ntBASIC17.6■□□□□ 0.41
RFC3P40938 AP000692.2-201ENST00000608391 879 ntBASIC17.6■□□□□ 0.41
RFC3P40938 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RFC3P40938 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 TCF3P1-201ENST00000423021 1937 ntBASIC17.6■□□□□ 0.41
RFC3P40938 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC3P40938 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC3P40938 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFC3P40938 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC3P40938 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RFC3P40938 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC3P40938 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC3P40938 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC3P40938 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFC3P40938 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC3P40938 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC3P40938 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
RFC3P40938 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFC3P40938 TERF1P1-201ENST00000311003 1181 ntBASIC17.59■□□□□ 0.41
RFC3P40938 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms