Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.45■□□□□ 0.7
XPAP23025 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.45■□□□□ 0.7
XPAP23025 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.45■□□□□ 0.7
XPAP23025 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
XPAP23025 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.45■□□□□ 0.7
XPAP23025 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
XPAP23025 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
XPAP23025 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.45■□□□□ 0.7
XPAP23025 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.45■□□□□ 0.7
XPAP23025 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
XPAP23025 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
XPAP23025 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
XPAP23025 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
XPAP23025 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
XPAP23025 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 B3GAT3P1-201ENST00000471720 806 ntBASIC19.44■□□□□ 0.7
XPAP23025 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
XPAP23025 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.44■□□□□ 0.7
XPAP23025 AC011298.2-201ENST00000617989 482 ntBASIC19.44■□□□□ 0.7
XPAP23025 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.44■□□□□ 0.7
XPAP23025 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.44■□□□□ 0.7
XPAP23025 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
XPAP23025 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
XPAP23025 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
XPAP23025 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
XPAP23025 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
XPAP23025 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.43■□□□□ 0.7
XPAP23025 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.43■□□□□ 0.7
XPAP23025 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.43■□□□□ 0.7
XPAP23025 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
XPAP23025 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.43■□□□□ 0.7
XPAP23025 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.43■□□□□ 0.7
XPAP23025 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.43■□□□□ 0.7
XPAP23025 AP000525.1-201ENST00000608286 694 ntBASIC19.43■□□□□ 0.7
XPAP23025 RCC2P6-201ENST00000526625 1557 ntBASIC19.43■□□□□ 0.7
XPAP23025 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
XPAP23025 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.43■□□□□ 0.7
XPAP23025 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
XPAP23025 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
XPAP23025 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
XPAP23025 LINC01465-201ENST00000408887 1940 ntBASIC19.43■□□□□ 0.7
XPAP23025 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
XPAP23025 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 MMP23A-201ENST00000234610 1017 ntBASIC19.42■□□□□ 0.7
XPAP23025 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
XPAP23025 MIR1238-201ENST00000408483 83 ntBASIC19.42■□□□□ 0.7
XPAP23025 AC011506.1-201ENST00000474329 610 ntBASIC19.42■□□□□ 0.7
XPAP23025 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
XPAP23025 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.42■□□□□ 0.7
XPAP23025 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.42■□□□□ 0.7
XPAP23025 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.42■□□□□ 0.7
XPAP23025 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
XPAP23025 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
XPAP23025 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
XPAP23025 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XPAP23025 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.42■□□□□ 0.7
XPAP23025 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms