Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gm15378-201ENSMUST00000121894 207 ntBASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gm38027-201ENSMUST00000192315 235 ntBASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-4-dv10A0A075B651 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trav4-4-dv10A0A075B651 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-4-dv10A0A075B651 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav4-4-dv10A0A075B651 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-4-dv10A0A075B651 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-4-dv10A0A075B651 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms