Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU7-136P-201ENST00000458819 69 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC017015.1-201ENST00000477387 286 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC090453.1-201ENST00000495560 436 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 TMEM251P1-201ENST00000503717 318 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC113430.1-201ENST00000506872 718 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AC010546.1-201ENST00000569391 485 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 EIF1P4-201ENST00000572664 335 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 MIR4716-201ENST00000579628 84 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 BNIP3P23-201ENST00000599655 511 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 Z99129.1-201ENST00000612510 255 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 SAGE4P-201ENST00000442271 3381 ntBASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB1Q9Y5F3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 ARF4P3-201ENST00000397387 509 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 EIF5P1-201ENST00000400019 1231 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RN7SKP266-201ENST00000410232 287 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 NUP35P2-201ENST00000416748 943 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 Z74696.2-201ENST00000436514 498 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RPL12P46-201ENST00000436610 195 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RPL36AP15-201ENST00000444514 266 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 RN7SL319P-201ENST00000480656 221 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC068587.1-201ENST00000483613 781 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC022447.3-201ENST00000506865 495 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 MRPS33P2-201ENST00000507850 322 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC109464.2-201ENST00000510242 943 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 FABP5P5-201ENST00000515537 406 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 LSM3P2-201ENST00000551246 273 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AL133457.1-201ENST00000564251 987 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 MAGOH2P-202ENST00000584384 429 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC011477.5-201ENST00000586571 259 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AL133338.2-201ENST00000604292 736 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 NDUFA8P1-201ENST00000605525 367 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC097468.3-201ENST00000607956 456 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC027807.2-201ENST00000616099 408 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC138932.5-201ENST00000617759 563 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC073968.1-201ENST00000618594 637 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 AC093591.3-201ENST00000634516 308 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 ELL2P4-201ENST00000446870 1376 ntBASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
PCDHB1Q9Y5F3 SAGE2P-201ENST00000420011 2126 ntBASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 RPL23AP57-201ENST00000332361 466 ntBASIC4.88□□□□□ -1.63
PCDHB1Q9Y5F3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms