Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 U3.12-201ENST00000364498 214 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 RPL30P2-201ENST00000414021 291 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 RPL31P50-201ENST00000471002 296 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AC112184.1-201ENST00000505179 312 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 MIR2114-201ENST00000516645 80 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AL359535.1-201ENST00000612100 1087 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 AC022509.4-201ENST00000621404 572 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 IGHVIII-44-202ENST00000636235 289 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN11AQ9UI33 MTND5P24-201ENST00000438892 1767 ntBASIC3.84□□□□□ -1.79
SCN11AQ9UI33 RPS4XP5-202ENST00000449995 1334 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.84□□□□□ -1.8
SCN11AQ9UI33 RN7SL432P-201ENST00000484057 298 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 AL035404.1-201ENST00000497982 568 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.84□□□□□ -1.8
SCN11AQ9UI33 RNU1-41P-201ENST00000516161 162 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 RNU1-48P-201ENST00000516400 162 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 COX6CP8-201ENST00000522620 226 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 CYCSP39-201ENST00000565821 309 ntBASIC3.84□□□□□ -1.8
SCN11AQ9UI33 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.84□□□□□ -1.8
SCN11AQ9UI33 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN11AQ9UI33 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SCN11AQ9UI33 AC110754.1-201ENST00000399740 601 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 RPL32P35-201ENST00000415214 394 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 AL445528.1-201ENST00000426330 420 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 VWA8P1-201ENST00000510889 176 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 AC103783.1-201ENST00000520506 373 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 AC104027.1-201ENST00000521887 300 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN11AQ9UI33 NRBF2P5-201ENST00000603087 788 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 AC131238.1-201ENST00000617135 328 ntBASIC3.83□□□□□ -1.8
SCN11AQ9UI33 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN11AQ9UI33 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 RNU6-859P-201ENST00000362728 107 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 MIR184-201ENST00000384962 84 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 RPL6P21-201ENST00000418672 846 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 snoU109.6-201ENST00000516831 118 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 PLCE1P1-201ENST00000622094 305 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AP003485.2-201ENST00000623636 610 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AL592494.2-201ENST00000425455 1548 ntBASIC3.82□□□□□ -1.8
SCN11AQ9UI33 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN11AQ9UI33 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL645937.1-202ENST00000421799 937 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL139281.1-201ENST00000422120 335 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AC073069.1-201ENST00000428657 441 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL365396.1-201ENST00000430854 671 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 METTL15P1-201ENST00000481421 1045 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 RPL23AP92-201ENST00000603609 255 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AC007566.2-201ENST00000603642 413 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 OR2AS2P-201ENST00000606902 342 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AC231759.1-201ENST00000616455 597 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL356490.1-201ENST00000623079 479 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 RPS7P13-201ENST00000413955 498 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL139413.1-201ENST00000421309 217 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 YWHAEP4-201ENST00000505390 198 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 AL592295.2-201ENST00000612578 206 ntBASIC3.81□□□□□ -1.8
SCN11AQ9UI33 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN11AQ9UI33 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC017002.4-201ENST00000604721 1525 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC015813.6-201ENST00000624409 5808 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 RNU1-75P-201ENST00000347264 129 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 SNORD56.3-201ENST00000363507 71 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms