Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HMGB1P9-201ENST00000429856 646 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL138799.3-201ENST00000438968 350 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 CEACAMP9-201ENST00000442990 513 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 RPS26P56-201ENST00000444468 240 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 OSTCP8-201ENST00000445117 448 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 RNU7-182P-201ENST00000459009 62 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 PABPC1P3-201ENST00000469174 459 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 HSD3BP3-201ENST00000514706 994 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.680-201ENST00000516441 93 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.700-201ENST00000516806 100 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 IGKV3D-34-201ENST00000522638 302 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AP000763.2-201ENST00000540641 163 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 CYCSP38-201ENST00000559840 322 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 OR1E3-201ENST00000575608 948 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 MIR3672-201ENST00000584290 82 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 MIR4443-201ENST00000585052 53 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 GLUD1P4-201ENST00000590914 418 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL008729.2-201ENST00000606393 473 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL021879.1-201ENST00000611756 288 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 MIR6085-201ENST00000618314 110 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC015967.1-201ENST00000619893 476 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 LINC02495-203ENST00000636704 242 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AKAP17BP-201ENST00000431706 2719 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC235565.1-201ENST00000456962 1325 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AL450326.2-201ENST00000421913 1962 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-200P-201ENST00000364743 107 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-713P-201ENST00000384761 107 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 DHFRP6-201ENST00000401776 268 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 RPS15AP30-201ENST00000420976 390 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC096632.1-201ENST00000427395 310 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 RPL36P19-201ENST00000430744 301 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC093156.1-201ENST00000440382 670 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 HMGB1P7-201ENST00000450921 612 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC023194.2-201ENST00000465398 406 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 CR383656.1-201ENST00000484916 377 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC090136.1-201ENST00000520009 240 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AL118558.2-201ENST00000556294 238 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC138761.3-201ENST00000579993 334 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AL589743.6-201ENST00000611025 117 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC074141.1-201ENST00000588129 2995 ntBASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms