Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL159987.1-201ENST00000347911 293 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 Y_RNA.133-201ENST00000363428 110 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 Y_RNA.202-201ENST00000364083 110 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 RNU6-606P-201ENST00000384721 111 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 RNU6-907P-201ENST00000390924 102 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL034417.1-201ENST00000399343 800 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 RNU2-62P-201ENST00000410868 191 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC245054.2-201ENST00000415639 319 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC007161.1-204ENST00000423039 460 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 RPL19P16-201ENST00000433839 588 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 RPEP4-201ENST00000437636 602 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL138799.3-201ENST00000438968 350 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 PPIAP32-201ENST00000449940 472 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 PPP1R2P5-201ENST00000457256 603 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC090096.1-201ENST00000489168 390 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 HSPD1P15-201ENST00000505573 1122 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC113367.2-201ENST00000505749 160 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 BNIP3P6-201ENST00000549284 499 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 DNAJC8P1-201ENST00000554535 372 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 MIR4776-2-201ENST00000580204 80 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC079597.1-201ENST00000624306 508 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC012618.3-205ENST00000637896 1496 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC107081.3-201ENST00000612715 2034 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 MTND5P1-201ENST00000445440 1375 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RNU6-463P-201ENST00000384340 107 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AL583835.1-201ENST00000399570 407 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AL009179.1-201ENST00000406085 265 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 RNU4-14P-201ENST00000410858 122 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPS15AP12-201ENST00000419498 388 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPL36P19-201ENST00000430744 301 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPS3AP52-201ENST00000435639 297 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPL23AP74-201ENST00000437246 471 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 DDX3P2-201ENST00000446138 111 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 CFL1P4-201ENST00000451536 498 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC007547.1-201ENST00000462177 490 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 PABPC1P3-201ENST00000469174 459 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPS24P16-201ENST00000497294 392 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC021146.1-201ENST00000511202 716 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 SCARNA20.4-201ENST00000516969 131 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 Y_RNA.718-201ENST00000517110 102 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 RN7SKP256-201ENST00000517201 314 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC021678.3-201ENST00000517893 476 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 ZNF705CP-201ENST00000530515 889 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 RPA2P1-201ENST00000556557 721 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.54□□□□□ -1.52
SSU72Q9NP77 MIR3146-201ENST00000580367 79 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 UBE2L4-201ENST00000587688 464 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AP001029.3-201ENST00000588063 596 ntBASIC5.54□□□□□ -1.52
SSU72Q9NP77 AL080274.1-201ENST00000605565 220 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms