Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RPL7P29-201ENST00000437151 728 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC093663.1-201ENST00000497190 394 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 FTH1P24-201ENST00000503502 462 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC133963.2-201ENST00000513686 578 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 SCARNA14-201ENST00000516903 136 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RNU6-352P-201ENST00000516908 107 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 IGKV2-36-201ENST00000519999 223 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC012254.4-201ENST00000588843 273 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL671309.1-201ENST00000603750 544 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC018618.2-201ENST00000604770 446 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL365400.2-201ENST00000605604 902 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 U6.48-201ENST00000618523 106 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 FP236240.3-201ENST00000623061 327 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL356094.1-201ENST00000624663 1212 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 CR392039.4-201ENST00000624968 501 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RNA5SP196-201ENST00000625967 102 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL079305.1-201ENST00000623159 3008 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 XPOTP1-201ENST00000443317 2398 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 RNU6-792P-201ENST00000363490 107 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 SNORA70.2-201ENST00000364506 135 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 PPIAP31-201ENST00000405422 495 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 MTATP6P31-201ENST00000406985 692 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 RPS24P8-201ENST00000431490 402 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL512661.1-201ENST00000434586 1253 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 CYCSP43-201ENST00000438233 310 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC010655.1-201ENST00000449336 292 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC022034.3-201ENST00000471393 478 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC010683.1-201ENST00000473673 378 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC108860.1-201ENST00000484521 383 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 HMGB1P21-201ENST00000502313 581 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 SNORA76.2-201ENST00000517095 137 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 HMGB1P23-201ENST00000518743 568 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC010198.2-201ENST00000550612 259 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 OR4U1P-201ENST00000554958 912 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AGGF1P6-201ENST00000569213 976 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC069304.3-201ENST00000603938 1084 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL136295.6-201ENST00000610486 658 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL512506.1-201ENST00000613918 449 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC099669.2-201ENST00000616549 437 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 ZYXP1-201ENST00000617638 118 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AL445493.3-201ENST00000619568 477 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC024023.1-201ENST00000624530 922 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 U6.107-201ENST00000637108 79 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 MTND5P19-201ENST00000424872 1794 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
HMG20AQ9NP66 AC118273.1-201ENST00000525324 3006 ntBASIC3.14□□□□□ -1.91
HMG20AQ9NP66 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 FAM91A3P-201ENST00000456826 2544 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms