Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 DPPA2P1-201ENST00000428060 556 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 CACYBPP1-201ENST00000438592 684 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 RPL21P23-201ENST00000446654 460 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC092754.2-201ENST00000463506 460 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC108471.1-201ENST00000513977 287 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC022695.1-201ENST00000522089 237 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AL161912.3-201ENST00000605404 628 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC006386.2-201ENST00000624491 75 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC012005.1-201ENST00000624575 75 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM4Q9C037 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM4Q9C037 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM4Q9C037 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM4Q9C037 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM4Q9C037 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 Y_RNA.510-201ENST00000384511 114 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 SDCBPP3-201ENST00000419629 891 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL645931.1-201ENST00000439737 410 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL591503.2-201ENST00000442314 1005 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 SLC31A1P1-201ENST00000451221 567 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 RN7SL283P-201ENST00000489055 303 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 SETP14-201ENST00000497538 873 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AP000919.1-202ENST00000581139 1264 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 MIR4506-201ENST00000584693 77 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AC135507.2-201ENST00000612443 309 ntBASIC3.52□□□□□ -1.85
TRIM4Q9C037 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM4Q9C037 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM4Q9C037 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM4Q9C037 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM4Q9C037 MIR148B-201ENST00000362252 99 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 RNA5SP432-201ENST00000362480 116 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 MT-TP-201ENST00000387461 68 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 AL583834.1-201ENST00000406943 343 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 RNA5SP120-201ENST00000410900 112 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 RNA5SP31-201ENST00000411144 127 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 MTCO3P21-201ENST00000430791 643 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 RPS3AP46-201ENST00000448352 682 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM4Q9C037 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 HAUS1P1-201ENST00000505275 832 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 FABP5P12-201ENST00000515543 389 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM4Q9C037 AL592494.3-201ENST00000609485 464 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 MIR6715A-201ENST00000615929 79 ntBASIC3.51□□□□□ -1.85
TRIM4Q9C037 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM4Q9C037 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM4Q9C037 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM4Q9C037 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM4Q9C037 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
TRIM4Q9C037 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM4Q9C037 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM4Q9C037 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM4Q9C037 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM4Q9C037 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM4Q9C037 RNA5SP383-201ENST00000362934 120 ntBASIC3.5□□□□□ -1.85
TRIM4Q9C037 RNA5SP235-201ENST00000365411 114 ntBASIC3.5□□□□□ -1.85
TRIM4Q9C037 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TRIM4Q9C037 AL034374.1-201ENST00000406329 351 ntBASIC3.5□□□□□ -1.85
TRIM4Q9C037 AC048351.1-201ENST00000420064 602 ntBASIC3.5□□□□□ -1.85
TRIM4Q9C037 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM4Q9C037 USP9YP36-201ENST00000424581 829 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms