Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC084035.1-201ENST00000634543 607 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC006971.1-201ENST00000407916 4486 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM54Q9BYV2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
TRIM54Q9BYV2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
TRIM54Q9BYV2 AC083843.3-201ENST00000623679 2186 ntBASIC4.71□□□□□ -1.65
TRIM54Q9BYV2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 RN7SKP95-201ENST00000362860 303 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 RNU5F-6P-201ENST00000362979 116 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AL031779.1-201ENST00000415663 330 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC004448.2-201ENST00000422360 586 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 NPM1P34-201ENST00000428821 893 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 RBMY2QP-201ENST00000429799 1147 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 RPL7AP6-201ENST00000477943 801 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 MRPS33P2-201ENST00000507850 322 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 SNORD116-26-201ENST00000516006 96 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 RNU1-6P-201ENST00000516290 144 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AP004247.1-201ENST00000531556 1289 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC092470.1-201ENST00000546187 132 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC012065.4-201ENST00000602445 679 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC068790.6-201ENST00000602558 258 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 PRELID3BP8-201ENST00000604148 295 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AL133338.2-201ENST00000604292 736 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC007497.1-201ENST00000610421 561 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AL121873.1-201ENST00000616013 524 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC000123.2-201ENST00000623124 461 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 TLK1P1-201ENST00000456760 2440 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 MAPK10-303ENST00000641324 3959 ntBASIC4.71□□□□□ -1.66
TRIM54Q9BYV2 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 LINC01355-201ENST00000566551 5444 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 MTND4P5-201ENST00000435821 1374 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 INTS6P1-201ENST00000504674 2530 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 OR10J6P-201ENST00000289731 930 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RNU1-130P-201ENST00000363930 160 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL031679.1-201ENST00000400616 525 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 DHFRP6-201ENST00000401776 268 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 BTBD10P2-201ENST00000404779 676 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 DPPA2P3-201ENST00000411853 655 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC007899.1-201ENST00000412776 775 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 TPMTP2-201ENST00000414372 726 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 OR4F13P-201ENST00000428478 931 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RPL37P21-201ENST00000435890 276 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RPL36AP15-201ENST00000444514 266 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 USP9YP29-201ENST00000445112 563 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 MTCO1P27-201ENST00000448269 226 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 SSXP1-201ENST00000453640 473 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RPL5P32-201ENST00000454085 879 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL136126.1-201ENST00000473603 402 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RN7SL177P-201ENST00000476596 299 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AP000797.1-201ENST00000478870 387 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 HMGB1P21-201ENST00000502313 581 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC093767.1-201ENST00000504523 156 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC079140.3-201ENST00000511111 550 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC024589.1-201ENST00000512207 263 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC025881.1-201ENST00000518851 512 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC022861.1-201ENST00000522981 663 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms