Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RPS27AP13-201ENST00000498403 237 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC021146.8-201ENST00000507455 733 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SALL3Q9BXA9 PARP4P3-201ENST00000510265 317 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC079140.3-201ENST00000511111 550 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.09□□□□□ -1.59
SALL3Q9BXA9 KCTD9P2-201ENST00000512203 1013 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC022447.1-201ENST00000515358 464 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SALL3Q9BXA9 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 OR5AK3P-201ENST00000527486 1297 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC027104.1-201ENST00000563702 681 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 ATP5F1P7-201ENST00000567330 760 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC068135.2-201ENST00000569293 1028 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 MIR5708-201ENST00000579723 85 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AL592221.1-201ENST00000605266 382 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC109347.2-201ENST00000610220 349 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC008443.7-201ENST00000622195 246 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 AC124312.6-202ENST00000623624 418 ntBASIC5.09□□□□□ -1.59
SALL3Q9BXA9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SALL3Q9BXA9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SALL3Q9BXA9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
SALL3Q9BXA9 A2MP1-204ENST00000566278 4130 ntBASIC5.09□□□□□ -1.6
SALL3Q9BXA9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SALL3Q9BXA9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC005539.1-201ENST00000443768 1479 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC092162.3-201ENST00000624511 1624 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MIR142-201ENST00000384835 87 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MIR93-201ENST00000385024 80 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MIR513A2-201ENST00000385249 127 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 RNA5SP296-201ENST00000410523 111 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 PAICSP7-201ENST00000419829 962 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 Z99497.1-201ENST00000421282 135 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC009480.2-201ENST00000422916 432 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 COX6B1P7-201ENST00000430845 235 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC016712.1-201ENST00000431088 378 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL590103.1-201ENST00000434488 307 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL356276.2-201ENST00000435919 558 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC006011.1-201ENST00000442758 349 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 COX6CP2-201ENST00000444980 225 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 CDC27P1-201ENST00000445384 715 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 RPL10P17-201ENST00000453852 316 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 RNU6-956P-201ENST00000458868 103 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 RPL7P18-201ENST00000478965 734 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 WBP1LP4-201ENST00000505043 344 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC091965.2-201ENST00000512324 613 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC106038.2-201ENST00000520706 568 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AP003730.1-201ENST00000524605 285 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MTND4LP18-201ENST00000526864 291 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 CYCSP29-201ENST00000533731 318 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC007954.1-201ENST00000554198 494 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL512347.1-201ENST00000566420 503 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 BNIP3P30-201ENST00000601184 574 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC006539.2-201ENST00000601729 572 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AL023881.1-201ENST00000621088 301 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MIR7702-201ENST00000621931 59 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC087821.2-201ENST00000637086 450 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 SEC63P2-201ENST00000503863 1939 ntBASIC5.08□□□□□ -1.6
SALL3Q9BXA9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.08□□□□□ -1.6
SALL3Q9BXA9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SALL3Q9BXA9 AC011477.1-204ENST00000623416 1325 ntBASIC5.07□□□□□ -1.6
SALL3Q9BXA9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SALL3Q9BXA9 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
SALL3Q9BXA9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SALL3Q9BXA9 AC116667.1-201ENST00000604855 2072 ntBASIC5.07□□□□□ -1.6
SALL3Q9BXA9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SALL3Q9BXA9 METTL21EP-201ENST00000298105 713 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms