Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC046144.1-201ENST00000478559 1853 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-353P-201ENST00000364266 108 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 SNORA73.2-201ENST00000364946 201 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 OR52E6-202ENST00000379946 954 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 SKINT1L-201ENST00000401057 817 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 MIR1303-201ENST00000408625 86 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 NANOGP5-201ENST00000424456 877 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 FAR2P4-202ENST00000425399 584 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 MTCYBP15-201ENST00000433123 1127 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 GTF2IP3-201ENST00000433887 494 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 USP9YP24-201ENST00000434374 697 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 USP9YP17-201ENST00000444617 696 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AL929288.2-201ENST00000446368 407 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 SNORD108-201ENST00000459332 71 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 SNORD11.1-201ENST00000459482 85 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RNU7-140P-201ENST00000459546 60 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC011276.1-201ENST00000469688 323 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC078785.3-201ENST00000476607 425 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 ACTG1P13-201ENST00000486987 1043 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC013356.1-201ENST00000489027 564 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC091167.1-201ENST00000492017 396 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RN7SKP289-201ENST00000517244 295 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 OR10V3P-201ENST00000525712 725 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AP001180.3-201ENST00000582221 145 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 BNIP3P4-201ENST00000604946 565 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 RNU4-5P-201ENST00000607255 135 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AC008147.4-201ENST00000617570 1204 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 AP001784.1-201ENST00000624107 428 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 SAGE2P-201ENST00000420011 2126 ntBASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC28BQ9BUN5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 ZNF29P-201ENST00000225587 168 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 RN7SKP103-201ENST00000363848 320 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 RNU4-51P-201ENST00000364206 140 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 MCTS2P-201ENST00000394552 546 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 SNORA11C-201ENST00000408532 129 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 TAF13P2-201ENST00000416876 286 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 OR10R1P-201ENST00000441524 1141 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 EIF2S2P2-201ENST00000447161 982 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 TPMTP4-201ENST00000450749 678 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 UQCRHP4-201ENST00000471686 272 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC091860.1-201ENST00000505723 432 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 NDUFA5P2-201ENST00000519723 344 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 DEFB130C-202ENST00000530001 230 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 UBE2NP1-201ENST00000545592 458 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms