Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 U1.25-201ENST00000614085 162 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 U1.34-201ENST00000618578 162 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 U1.31-201ENST00000620022 160 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
TRIM47Q96LD4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 ZNF652P1-201ENST00000442420 1309 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RNU6-1066P-201ENST00000363573 105 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.477-201ENST00000384352 108 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RNU6-310P-201ENST00000384655 107 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 MIR514A2-201ENST00000385131 88 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 MIR514A3-201ENST00000385132 88 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 SNORD37.1-201ENST00000390968 65 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL133270.1-201ENST00000402635 279 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC013404.1-201ENST00000413068 249 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 NME1P1-201ENST00000420914 382 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 HMGB3P24-201ENST00000433260 622 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 FTH1P16-201ENST00000435241 552 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL390119.1-201ENST00000440329 312 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 GSTA11P-201ENST00000452866 669 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 DNAJC19P8-201ENST00000452887 259 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC005532.2-201ENST00000467154 373 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RPL7P5-201ENST00000471472 736 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RN7SL860P-201ENST00000473738 223 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL163973.1-201ENST00000484753 577 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL035690.1-201ENST00000490892 383 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RN7SKP67-201ENST00000515905 235 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC022360.1-201ENST00000521058 340 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 HAUS8P1-201ENST00000549005 542 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 IMMP1LP2-201ENST00000552954 492 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL049870.4-201ENST00000555741 486 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AC099489.2-201ENST00000574976 260 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL670379.11-201ENST00000604059 253 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL670379.10-201ENST00000604330 253 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL670379.12-201ENST00000605291 253 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL670379.9-201ENST00000605428 253 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL359091.1-201ENST00000449048 1734 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AL731566.1-201ENST00000620490 1937 ntBASIC6.83□□□□□ -1.32
TRIM47Q96LD4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TRIM47Q96LD4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 AC022164.1-201ENST00000568767 2673 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 AC010132.2-201ENST00000295493 1043 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 RN7SKP115-201ENST00000363177 317 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.461-201ENST00000384263 103 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.463-201ENST00000384271 102 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 RPL23AP17-201ENST00000401064 499 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 SSXP10-201ENST00000402595 565 ntBASIC6.82□□□□□ -1.32
TRIM47Q96LD4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM47Q96LD4 SLC35E1P1-201ENST00000419313 864 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms